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Cluster: MGYG000003793_CGC1

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme MGYG000003793_4 MGYG000003793_4_9 8960 10387 + GT5
CAZyme MGYG000003793_4 MGYG000003793_4_10 10371 12368 + GH13_14
pfam MGYG000003793_4 MGYG000003793_4_11 12358 14052 + PGM_PMM_IV | PGM_PMM_I | PGM_PMM_II | PGM_PMM_III
STP MGYG000003793_4 MGYG000003793_4_12 14205 14708 + FHA
TC MGYG000003793_4 MGYG000003793_4_13 14701 15957 + 2.A.103.1.3
pfam MGYG000003793_4 MGYG000003793_4_14 15959 17362 + Transpeptidase
pfam MGYG000003793_4 MGYG000003793_4_15 17325 18161 - NAD_kinase | NAD_kinase_C
CAZyme MGYG000003793_4 MGYG000003793_4_16 18268 19620 + GH25
Gene ID: MGYG000003793_4_9
Type: CAZyme
Location: 8960 - 10387 (+)
Gene ID: MGYG000003793_4_10
Type: CAZyme
Location: 10371 - 12368 (+)
Gene ID: MGYG000003793_4_11
Type: pfam
Location: 12358 - 14052 (+)
Gene ID: MGYG000003793_4_12
Type: STP
Location: 14205 - 14708 (+)
Gene ID: MGYG000003793_4_13
Type: TC
Location: 14701 - 15957 (+)
Gene ID: MGYG000003793_4_14
Type: pfam
Location: 15959 - 17362 (+)
Gene ID: MGYG000003793_4_15
Type: pfam
Location: 17325 - 18161 (-)
Gene ID: MGYG000003793_4_16
Type: CAZyme
Location: 18268 - 19620 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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