Cluster: MGYG000003788_CGC5
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000003788
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000003788_39 | MGYG000003788_39_5 | 4760 | 6505 | - | 3.A.1.135.5 |
| pfam | MGYG000003788_39 | MGYG000003788_39_6 | 6492 | 7595 | - | LpxB |
| CAZyme | MGYG000003788_39 | MGYG000003788_39_7 | 7592 | 8695 | - | GT19 |
| pfam | MGYG000003788_39 | MGYG000003788_39_8 | 8680 | 9504 | - | LpxI_C | LpxI_N |
| TC | MGYG000003788_39 | MGYG000003788_39_9 | 9501 | 10607 | - | 1.B.42.1.13 |
Gene ID: MGYG000003788_39_5
Type: TC
Location: 4760 - 6505 (-)
Type: TC
Location: 4760 - 6505 (-)
Gene ID: MGYG000003788_39_6
Type: pfam
Location: 6492 - 7595 (-)
Type: pfam
Location: 6492 - 7595 (-)
Gene ID: MGYG000003788_39_7
Type: CAZyme
Location: 7592 - 8695 (-)
Type: CAZyme
Location: 7592 - 8695 (-)
Gene ID: MGYG000003788_39_8
Type: pfam
Location: 8680 - 9504 (-)
Type: pfam
Location: 8680 - 9504 (-)
Gene ID: MGYG000003788_39_9
Type: TC
Location: 9501 - 10607 (-)
Type: TC
Location: 9501 - 10607 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Synergistota
Class
Synergistia
Order
Synergistales
Family
Dethiosulfovibrionaceae
Genus
Pyramidobacter
Species
Pyramidobacter sp902489135
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.