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Cluster: MGYG000003788_CGC2

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC MGYG000003788_4 MGYG000003788_4_9 8340 8963 + 9.B.18.1.2
pfam MGYG000003788_4 MGYG000003788_4_10 8967 9608 + PglD_N
CAZyme MGYG000003788_4 MGYG000003788_4_11 9614 10753 + GT4
CAZyme MGYG000003788_4 MGYG000003788_4_12 10784 11917 + GT4
pfam MGYG000003788_4 MGYG000003788_4_13 12146 13375 - UPF0020 | TRM5-TYW2_MTfase | Cons_hypoth95 | MTS | PrmA | Methyltransf_15 | Methyltrans_SAM | Methyltransf_25 | Methyltransf_31 | PUA_3
pfam MGYG000003788_4 MGYG000003788_4_14 13646 14146 + PCC
TC MGYG000003788_4 MGYG000003788_4_15 14614 15492 - 3.A.1.5.2
pfam MGYG000003788_4 MGYG000003788_4_16 15734 16426 + Asp_Glu_race
NULL(UNKNOWN) MGYG000003788_4 MGYG000003788_4_17 16490 17488 - NULL(UNKNOWN)
[View Structural Homologs]
TC MGYG000003788_4 MGYG000003788_4_18 17520 18023 - 2.A.88.3.1
Gene ID: MGYG000003788_4_9
Type: TC
Location: 8340 - 8963 (+)
Gene ID: MGYG000003788_4_10
Type: pfam
Location: 8967 - 9608 (+)
Gene ID: MGYG000003788_4_11
Type: CAZyme
Location: 9614 - 10753 (+)
Gene ID: MGYG000003788_4_12
Type: CAZyme
Location: 10784 - 11917 (+)
Gene ID: MGYG000003788_4_13
Type: pfam
Location: 12146 - 13375 (-)
Gene ID: MGYG000003788_4_14
Type: pfam
Location: 13646 - 14146 (+)
Gene ID: MGYG000003788_4_15
Type: TC
Location: 14614 - 15492 (-)
Gene ID: MGYG000003788_4_16
Type: pfam
Location: 15734 - 16426 (+)
Gene ID: MGYG000003788_4_17
Type:
Location: 16490 - 17488 (-)
Gene ID: MGYG000003788_4_18
Type: TC
Location: 17520 - 18023 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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