Cluster: MGYG000003769_CGC42
🧬 Cluster Details
- Gene Count: 18
- CAZyme Count: 4
- Substrate:
- Genome ID: MGYG000003769
- CGC Family ID: CGCFAM_07730
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000003769_22 | MGYG000003769_22_34 | 45942 | 46916 | - | GH43_26 |
| pfam | MGYG000003769_22 | MGYG000003769_22_35 | 46998 | 48779 | - | Laminin_G_3 | Laminin_G_3 |
| STP | MGYG000003769_22 | MGYG000003769_22_36 | 48878 | 50392 | - | SBP_bac_1 |
| TC | MGYG000003769_22 | MGYG000003769_22_37 | 50528 | 51514 | - | 3.A.1.1.20 |
| TC | MGYG000003769_22 | MGYG000003769_22_38 | 51515 | 52510 | - | 3.A.1.1.11 |
| pfam | MGYG000003769_22 | MGYG000003769_22_39 | 52507 | 54777 | - | DUF5696 |
| pfam | MGYG000003769_22 | MGYG000003769_22_40 | 54767 | 56812 | - | Yip1 |
| TC | MGYG000003769_22 | MGYG000003769_22_41 | 56833 | 57702 | - | 3.A.1.1.36 |
| TC | MGYG000003769_22 | MGYG000003769_22_42 | 57718 | 58623 | - | 3.A.1.1.4 |
| STP | MGYG000003769_22 | MGYG000003769_22_43 | 58639 | 61626 | - | SBP_bac_1 |
| CAZyme | MGYG000003769_22 | MGYG000003769_22_44 | 61638 | 63146 | - | GH51_1 |
| TF | MGYG000003769_22 | MGYG000003769_22_45 | 63699 | 64625 | + | HTH_5 |
| CAZyme | MGYG000003769_22 | MGYG000003769_22_46 | 65023 | 66693 | - | GH43_4 |
| NULL(UNKNOWN) | MGYG000003769_22 | MGYG000003769_22_47 | 66690 | 66935 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | MGYG000003769_22 | MGYG000003769_22_48 | 67108 | 69375 | + | GH51_2 |
| STP | MGYG000003769_22 | MGYG000003769_22_49 | 69496 | 70752 | - | SBP_bac_3 |
| TC | MGYG000003769_22 | MGYG000003769_22_50 | 70766 | 71617 | - | 3.A.1.16.3 |
| TC | MGYG000003769_22 | MGYG000003769_22_51 | 71611 | 72597 | - | 3.A.1.16.4 |
Gene ID: MGYG000003769_22_34
Type: CAZyme
Location: 45942 - 46916 (-)
Type: CAZyme
Location: 45942 - 46916 (-)
Gene ID: MGYG000003769_22_35
Type: pfam
Location: 46998 - 48779 (-)
Type: pfam
Location: 46998 - 48779 (-)
Gene ID: MGYG000003769_22_36
Type: STP
Location: 48878 - 50392 (-)
Type: STP
Location: 48878 - 50392 (-)
Gene ID: MGYG000003769_22_37
Type: TC
Location: 50528 - 51514 (-)
Type: TC
Location: 50528 - 51514 (-)
Gene ID: MGYG000003769_22_38
Type: TC
Location: 51515 - 52510 (-)
Type: TC
Location: 51515 - 52510 (-)
Gene ID: MGYG000003769_22_39
Type: pfam
Location: 52507 - 54777 (-)
Type: pfam
Location: 52507 - 54777 (-)
Gene ID: MGYG000003769_22_40
Type: pfam
Location: 54767 - 56812 (-)
Type: pfam
Location: 54767 - 56812 (-)
Gene ID: MGYG000003769_22_41
Type: TC
Location: 56833 - 57702 (-)
Type: TC
Location: 56833 - 57702 (-)
Gene ID: MGYG000003769_22_42
Type: TC
Location: 57718 - 58623 (-)
Type: TC
Location: 57718 - 58623 (-)
Gene ID: MGYG000003769_22_43
Type: STP
Location: 58639 - 61626 (-)
Type: STP
Location: 58639 - 61626 (-)
Gene ID: MGYG000003769_22_44
Type: CAZyme
Location: 61638 - 63146 (-)
Type: CAZyme
Location: 61638 - 63146 (-)
Gene ID: MGYG000003769_22_45
Type: TF
Location: 63699 - 64625 (+)
Type: TF
Location: 63699 - 64625 (+)
Gene ID: MGYG000003769_22_46
Type: CAZyme
Location: 65023 - 66693 (-)
Type: CAZyme
Location: 65023 - 66693 (-)
Gene ID: MGYG000003769_22_47
Type:
Location: 66690 - 66935 (-)
Type:
Location: 66690 - 66935 (-)
Gene ID: MGYG000003769_22_48
Type: CAZyme
Location: 67108 - 69375 (+)
Type: CAZyme
Location: 67108 - 69375 (+)
Gene ID: MGYG000003769_22_49
Type: STP
Location: 69496 - 70752 (-)
Type: STP
Location: 69496 - 70752 (-)
Gene ID: MGYG000003769_22_50
Type: TC
Location: 70766 - 71617 (-)
Type: TC
Location: 70766 - 71617 (-)
Gene ID: MGYG000003769_22_51
Type: TC
Location: 71611 - 72597 (-)
Type: TC
Location: 71611 - 72597 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Lachnoclostridium
Species
Lachnoclostridium sp905192625
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.