Cluster: MGYG000003769_CGC24
🧬 Cluster Details
- Gene Count: 12
- CAZyme Count: 5
- Substrate:
- Genome ID: MGYG000003769
- CGC Family ID: CGCFAM_04448
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000003769_11 | MGYG000003769_11_15 | 18151 | 19068 | + | 3.A.1.1.11 |
| TC | MGYG000003769_11 | MGYG000003769_11_16 | 19061 | 19972 | + | 3.A.1.1.36 |
| STP | MGYG000003769_11 | MGYG000003769_11_17 | 20006 | 21490 | + | SBP_bac_1 |
| TF | MGYG000003769_11 | MGYG000003769_11_18 | 21629 | 22507 | + | HTH_AraC | HTH_AraC |
| CAZyme | MGYG000003769_11 | MGYG000003769_11_19 | 22512 | 24884 | + | GH95 |
| NULL(UNKNOWN) | MGYG000003769_11 | MGYG000003769_11_20 | 25001 | 27055 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | MGYG000003769_11 | MGYG000003769_11_21 | 27252 | 30221 | + | GH106 |
| CAZyme | MGYG000003769_11 | MGYG000003769_11_22 | 30464 | 31558 | + | GH105 |
| CAZyme | MGYG000003769_11 | MGYG000003769_11_23 | 31931 | 33055 | + | GH105 |
| CAZyme | MGYG000003769_11 | MGYG000003769_11_24 | 33404 | 34966 | + | GH28 |
| TC | MGYG000003769_11 | MGYG000003769_11_25 | 35172 | 38159 | + | 3.A.1.135.5 |
| TC | MGYG000003769_11 | MGYG000003769_11_26 | 38178 | 40364 | + | 3.A.1.135.5 |
Gene ID: MGYG000003769_11_15
Type: TC
Location: 18151 - 19068 (+)
Type: TC
Location: 18151 - 19068 (+)
Gene ID: MGYG000003769_11_16
Type: TC
Location: 19061 - 19972 (+)
Type: TC
Location: 19061 - 19972 (+)
Gene ID: MGYG000003769_11_17
Type: STP
Location: 20006 - 21490 (+)
Type: STP
Location: 20006 - 21490 (+)
Gene ID: MGYG000003769_11_18
Type: TF
Location: 21629 - 22507 (+)
Type: TF
Location: 21629 - 22507 (+)
Gene ID: MGYG000003769_11_19
Type: CAZyme
Location: 22512 - 24884 (+)
Type: CAZyme
Location: 22512 - 24884 (+)
Gene ID: MGYG000003769_11_20
Type:
Location: 25001 - 27055 (+)
Type:
Location: 25001 - 27055 (+)
Gene ID: MGYG000003769_11_21
Type: CAZyme
Location: 27252 - 30221 (+)
Type: CAZyme
Location: 27252 - 30221 (+)
Gene ID: MGYG000003769_11_22
Type: CAZyme
Location: 30464 - 31558 (+)
Type: CAZyme
Location: 30464 - 31558 (+)
Gene ID: MGYG000003769_11_23
Type: CAZyme
Location: 31931 - 33055 (+)
Type: CAZyme
Location: 31931 - 33055 (+)
Gene ID: MGYG000003769_11_24
Type: CAZyme
Location: 33404 - 34966 (+)
Type: CAZyme
Location: 33404 - 34966 (+)
Gene ID: MGYG000003769_11_25
Type: TC
Location: 35172 - 38159 (+)
Type: TC
Location: 35172 - 38159 (+)
Gene ID: MGYG000003769_11_26
Type: TC
Location: 38178 - 40364 (+)
Type: TC
Location: 38178 - 40364 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Lachnoclostridium
Species
Lachnoclostridium sp905192625
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.