Cluster: MGYG000003769_CGC21
🧬 Cluster Details
- Gene Count: 12
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000003769
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000003769_9 | MGYG000003769_9_107 | 114339 | 115934 | + | 3.A.1.5.18 |
| TC | MGYG000003769_9 | MGYG000003769_9_108 | 115995 | 116993 | + | 3.A.1.5.20 |
| TC | MGYG000003769_9 | MGYG000003769_9_109 | 116986 | 117828 | + | 3.A.1.5.16 |
| TC | MGYG000003769_9 | MGYG000003769_9_110 | 117854 | 118813 | + | 3.A.1.5.2 |
| TC | MGYG000003769_9 | MGYG000003769_9_111 | 118803 | 119426 | + | 3.A.1.5.3 |
| pfam | MGYG000003769_9 | MGYG000003769_9_112 | 119819 | 120133 | + | Thioredoxin | Thioredoxin_2 | Thioredoxin_3 | TraF | Thioredoxin_9 |
| TF | MGYG000003769_9 | MGYG000003769_9_113 | 120921 | 121823 | + | HTH_1 |
| TC | MGYG000003769_9 | MGYG000003769_9_114 | 122355 | 123398 | + | 3.A.1.24.3 |
| TC | MGYG000003769_9 | MGYG000003769_9_115 | 123382 | 124062 | + | 3.A.1.24.5 |
| pfam | MGYG000003769_9 | MGYG000003769_9_116 | 124088 | 125047 | + | Ldh_1_N | Ldh_1_C |
| TC | MGYG000003769_9 | MGYG000003769_9_117 | 125196 | 126071 | + | 3.A.1.24.1 |
| CAZyme | MGYG000003769_9 | MGYG000003769_9_118 | 126150 | 127523 | + | AA4 |
Gene ID: MGYG000003769_9_107
Type: TC
Location: 114339 - 115934 (+)
Type: TC
Location: 114339 - 115934 (+)
Gene ID: MGYG000003769_9_108
Type: TC
Location: 115995 - 116993 (+)
Type: TC
Location: 115995 - 116993 (+)
Gene ID: MGYG000003769_9_109
Type: TC
Location: 116986 - 117828 (+)
Type: TC
Location: 116986 - 117828 (+)
Gene ID: MGYG000003769_9_110
Type: TC
Location: 117854 - 118813 (+)
Type: TC
Location: 117854 - 118813 (+)
Gene ID: MGYG000003769_9_111
Type: TC
Location: 118803 - 119426 (+)
Type: TC
Location: 118803 - 119426 (+)
Gene ID: MGYG000003769_9_112
Type: pfam
Location: 119819 - 120133 (+)
Type: pfam
Location: 119819 - 120133 (+)
Gene ID: MGYG000003769_9_113
Type: TF
Location: 120921 - 121823 (+)
Type: TF
Location: 120921 - 121823 (+)
Gene ID: MGYG000003769_9_114
Type: TC
Location: 122355 - 123398 (+)
Type: TC
Location: 122355 - 123398 (+)
Gene ID: MGYG000003769_9_115
Type: TC
Location: 123382 - 124062 (+)
Type: TC
Location: 123382 - 124062 (+)
Gene ID: MGYG000003769_9_116
Type: pfam
Location: 124088 - 125047 (+)
Type: pfam
Location: 124088 - 125047 (+)
Gene ID: MGYG000003769_9_117
Type: TC
Location: 125196 - 126071 (+)
Type: TC
Location: 125196 - 126071 (+)
Gene ID: MGYG000003769_9_118
Type: CAZyme
Location: 126150 - 127523 (+)
Type: CAZyme
Location: 126150 - 127523 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Lachnoclostridium
Species
Lachnoclostridium sp905192625
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.