Cluster: MGYG000003769_CGC13
🧬 Cluster Details
- Gene Count: 13
- CAZyme Count: 7
- Substrate:
- Genome ID: MGYG000003769
- CGC Family ID: CGCFAM_06105
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000003769_6 | MGYG000003769_6_46 | 42616 | 43671 | - | GH179 |
| TF | MGYG000003769_6 | MGYG000003769_6_47 | 43959 | 44750 | + | HTH_AraC |
| CAZyme | MGYG000003769_6 | MGYG000003769_6_48 | 44811 | 46508 | - | CBM91 | GH43_12 |
| CAZyme | MGYG000003769_6 | MGYG000003769_6_49 | 46759 | 48909 | + | GH3 |
| CAZyme | MGYG000003769_6 | MGYG000003769_6_50 | 49044 | 51032 | + | GH67 |
| TC | MGYG000003769_6 | MGYG000003769_6_51 | 51368 | 53215 | + | 3.A.1.106.1 |
| TC | MGYG000003769_6 | MGYG000003769_6_52 | 53226 | 55025 | + | 3.A.1.111.2 |
| CAZyme | MGYG000003769_6 | MGYG000003769_6_53 | 55520 | 57214 | + | CE17 |
| CAZyme | MGYG000003769_6 | MGYG000003769_6_54 | 57294 | 60239 | + | GH115 |
| CAZyme | MGYG000003769_6 | MGYG000003769_6_55 | 60532 | 64014 | + | GH2 |
| TF | MGYG000003769_6 | MGYG000003769_6_56 | 64179 | 65135 | - | HTH_AraC | HTH_AraC |
| TC | MGYG000003769_6 | MGYG000003769_6_57 | 65661 | 66608 | + | 3.A.1.1.10 |
| TC | MGYG000003769_6 | MGYG000003769_6_58 | 66621 | 67544 | + | 3.A.1.1.29 |
Gene ID: MGYG000003769_6_46
Type: CAZyme
Location: 42616 - 43671 (-)
Type: CAZyme
Location: 42616 - 43671 (-)
Gene ID: MGYG000003769_6_47
Type: TF
Location: 43959 - 44750 (+)
Type: TF
Location: 43959 - 44750 (+)
Gene ID: MGYG000003769_6_48
Type: CAZyme
Location: 44811 - 46508 (-)
Type: CAZyme
Location: 44811 - 46508 (-)
Gene ID: MGYG000003769_6_49
Type: CAZyme
Location: 46759 - 48909 (+)
Type: CAZyme
Location: 46759 - 48909 (+)
Gene ID: MGYG000003769_6_50
Type: CAZyme
Location: 49044 - 51032 (+)
Type: CAZyme
Location: 49044 - 51032 (+)
Gene ID: MGYG000003769_6_51
Type: TC
Location: 51368 - 53215 (+)
Type: TC
Location: 51368 - 53215 (+)
Gene ID: MGYG000003769_6_52
Type: TC
Location: 53226 - 55025 (+)
Type: TC
Location: 53226 - 55025 (+)
Gene ID: MGYG000003769_6_53
Type: CAZyme
Location: 55520 - 57214 (+)
Type: CAZyme
Location: 55520 - 57214 (+)
Gene ID: MGYG000003769_6_54
Type: CAZyme
Location: 57294 - 60239 (+)
Type: CAZyme
Location: 57294 - 60239 (+)
Gene ID: MGYG000003769_6_55
Type: CAZyme
Location: 60532 - 64014 (+)
Type: CAZyme
Location: 60532 - 64014 (+)
Gene ID: MGYG000003769_6_56
Type: TF
Location: 64179 - 65135 (-)
Type: TF
Location: 64179 - 65135 (-)
Gene ID: MGYG000003769_6_57
Type: TC
Location: 65661 - 66608 (+)
Type: TC
Location: 65661 - 66608 (+)
Gene ID: MGYG000003769_6_58
Type: TC
Location: 66621 - 67544 (+)
Type: TC
Location: 66621 - 67544 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Lachnoclostridium
Species
Lachnoclostridium sp905192625
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.