Cluster: MGYG000003769_CGC11
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000003769
- CGC Family ID: CGCFAM_00009
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000003769_5 | MGYG000003769_5_28 | 35039 | 36412 | + | 3.A.1.104.1 |
| TC | MGYG000003769_5 | MGYG000003769_5_29 | 36433 | 37704 | + | 3.A.1.103.6 |
| pfam | MGYG000003769_5 | MGYG000003769_5_30 | 37729 | 38622 | + | CMAS | NodS | Methyltransf_11 | Methyltransf_12 | Methyltransf_23 | Methyltransf_25 | Methyltransf_31 |
| NULL(UNKNOWN) | MGYG000003769_5 | MGYG000003769_5_31 | 38666 | 40090 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | MGYG000003769_5 | MGYG000003769_5_32 | 40127 | 42301 | + | GT2 | GT2 |
Gene ID: MGYG000003769_5_28
Type: TC
Location: 35039 - 36412 (+)
Type: TC
Location: 35039 - 36412 (+)
Gene ID: MGYG000003769_5_29
Type: TC
Location: 36433 - 37704 (+)
Type: TC
Location: 36433 - 37704 (+)
Gene ID: MGYG000003769_5_30
Type: pfam
Location: 37729 - 38622 (+)
Type: pfam
Location: 37729 - 38622 (+)
Gene ID: MGYG000003769_5_31
Type:
Location: 38666 - 40090 (+)
Type:
Location: 38666 - 40090 (+)
Gene ID: MGYG000003769_5_32
Type: CAZyme
Location: 40127 - 42301 (+)
Type: CAZyme
Location: 40127 - 42301 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Lachnoclostridium
Species
Lachnoclostridium sp905192625
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.