Cluster: MGYG000003742_CGC31
🧬 Cluster Details
- Gene Count: 12
- CAZyme Count: 5
- Substrate:
- Genome ID: MGYG000003742
- CGC Family ID: CGCFAM_00440
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000003742_37 | MGYG000003742_37_1 | 369 | 3389 | + | 1.B.14.6.1 |
| TC | MGYG000003742_37 | MGYG000003742_37_2 | 3415 | 4881 | + | 8.A.46.1.6 |
| CAZyme | MGYG000003742_37 | MGYG000003742_37_3 | 4874 | 7063 | + | CBM32 | GH43_28 |
| CAZyme | MGYG000003742_37 | MGYG000003742_37_4 | 7090 | 8427 | + | GH144 |
| CAZyme | MGYG000003742_37 | MGYG000003742_37_5 | 8443 | 10722 | + | GH3 |
| NULL(UNKNOWN) | MGYG000003742_37 | MGYG000003742_37_6 | 11044 | 11229 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | MGYG000003742_37 | MGYG000003742_37_7 | 11400 | 13175 | - | S1 | S1 | S1 | S1 | S1 | S1 |
| TC | MGYG000003742_37 | MGYG000003742_37_8 | 14220 | 15575 | + | 9.B.145.1.2 |
| NULL(UNKNOWN) | MGYG000003742_37 | MGYG000003742_37_9 | 15575 | 15697 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| NULL(UNKNOWN) | MGYG000003742_37 | MGYG000003742_37_10 | 15643 | 16068 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | MGYG000003742_37 | MGYG000003742_37_11 | 16140 | 17930 | + | GT3 |
| CAZyme | MGYG000003742_37 | MGYG000003742_37_12 | 17958 | 20519 | + | GT35 |
Gene ID: MGYG000003742_37_1
Type: TC
Location: 369 - 3389 (+)
Type: TC
Location: 369 - 3389 (+)
Gene ID: MGYG000003742_37_2
Type: TC
Location: 3415 - 4881 (+)
Type: TC
Location: 3415 - 4881 (+)
Gene ID: MGYG000003742_37_3
Type: CAZyme
Location: 4874 - 7063 (+)
Type: CAZyme
Location: 4874 - 7063 (+)
Gene ID: MGYG000003742_37_4
Type: CAZyme
Location: 7090 - 8427 (+)
Type: CAZyme
Location: 7090 - 8427 (+)
Gene ID: MGYG000003742_37_5
Type: CAZyme
Location: 8443 - 10722 (+)
Type: CAZyme
Location: 8443 - 10722 (+)
Gene ID: MGYG000003742_37_6
Type:
Location: 11044 - 11229 (-)
Type:
Location: 11044 - 11229 (-)
Gene ID: MGYG000003742_37_7
Type: pfam
Location: 11400 - 13175 (-)
Type: pfam
Location: 11400 - 13175 (-)
Gene ID: MGYG000003742_37_8
Type: TC
Location: 14220 - 15575 (+)
Type: TC
Location: 14220 - 15575 (+)
Gene ID: MGYG000003742_37_9
Type:
Location: 15575 - 15697 (+)
Type:
Location: 15575 - 15697 (+)
Gene ID: MGYG000003742_37_10
Type:
Location: 15643 - 16068 (-)
Type:
Location: 15643 - 16068 (-)
Gene ID: MGYG000003742_37_11
Type: CAZyme
Location: 16140 - 17930 (+)
Type: CAZyme
Location: 16140 - 17930 (+)
Gene ID: MGYG000003742_37_12
Type: CAZyme
Location: 17958 - 20519 (+)
Type: CAZyme
Location: 17958 - 20519 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Prevotella
Species
Prevotella buccalis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.