Cluster: MGYG000003742_CGC18
🧬 Cluster Details
- Gene Count: 11
- CAZyme Count: 4
- Substrate:
- Genome ID: MGYG000003742
- CGC Family ID: CGCFAM_05783
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000003742_15 | MGYG000003742_15_14 | 16542 | 18212 | + | 3.A.1.106.2 |
| pfam | MGYG000003742_15 | MGYG000003742_15_15 | 18219 | 18773 | + | Thioredoxin | AhpC-TSA | Redoxin | Thioredoxin_2 | Thioredoxin_8 |
| TC | MGYG000003742_15 | MGYG000003742_15_16 | 18770 | 19489 | + | 3.A.1.122.14 |
| TC | MGYG000003742_15 | MGYG000003742_15_17 | 19509 | 20771 | + | 3.A.1.122.2 |
| TC | MGYG000003742_15 | MGYG000003742_15_18 | 20775 | 22019 | + | 3.A.1.122.2 |
| pfam | MGYG000003742_15 | MGYG000003742_15_19 | 22113 | 23216 | + | HlyD_3 | HlyD_D23 |
| CAZyme | MGYG000003742_15 | MGYG000003742_15_20 | 23807 | 25078 | + | GT4 |
| CAZyme | MGYG000003742_15 | MGYG000003742_15_21 | 25348 | 26124 | + | GT2 |
| NULL(UNKNOWN) | MGYG000003742_15 | MGYG000003742_15_22 | 26064 | 26321 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | MGYG000003742_15 | MGYG000003742_15_23 | 26778 | 28250 | - | GH13_5 |
| CAZyme | MGYG000003742_15 | MGYG000003742_15_24 | 28742 | 29692 | - | CBM50 |
Gene ID: MGYG000003742_15_14
Type: TC
Location: 16542 - 18212 (+)
Type: TC
Location: 16542 - 18212 (+)
Gene ID: MGYG000003742_15_15
Type: pfam
Location: 18219 - 18773 (+)
Type: pfam
Location: 18219 - 18773 (+)
Gene ID: MGYG000003742_15_16
Type: TC
Location: 18770 - 19489 (+)
Type: TC
Location: 18770 - 19489 (+)
Gene ID: MGYG000003742_15_17
Type: TC
Location: 19509 - 20771 (+)
Type: TC
Location: 19509 - 20771 (+)
Gene ID: MGYG000003742_15_18
Type: TC
Location: 20775 - 22019 (+)
Type: TC
Location: 20775 - 22019 (+)
Gene ID: MGYG000003742_15_19
Type: pfam
Location: 22113 - 23216 (+)
Type: pfam
Location: 22113 - 23216 (+)
Gene ID: MGYG000003742_15_20
Type: CAZyme
Location: 23807 - 25078 (+)
Type: CAZyme
Location: 23807 - 25078 (+)
Gene ID: MGYG000003742_15_21
Type: CAZyme
Location: 25348 - 26124 (+)
Type: CAZyme
Location: 25348 - 26124 (+)
Gene ID: MGYG000003742_15_22
Type:
Location: 26064 - 26321 (-)
Type:
Location: 26064 - 26321 (-)
Gene ID: MGYG000003742_15_23
Type: CAZyme
Location: 26778 - 28250 (-)
Type: CAZyme
Location: 26778 - 28250 (-)
Gene ID: MGYG000003742_15_24
Type: CAZyme
Location: 28742 - 29692 (-)
Type: CAZyme
Location: 28742 - 29692 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Prevotella
Species
Prevotella buccalis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.