Cluster: MGYG000003742_CGC10
🧬 Cluster Details
- Gene Count: 12
- CAZyme Count: 5
- Substrate:
- Genome ID: MGYG000003742
- CGC Family ID: CGCFAM_00034
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000003742_9 | MGYG000003742_9_25 | 30680 | 32305 | - | 1.C.12.1.10 |
| NULL(UNKNOWN) | MGYG000003742_9 | MGYG000003742_9_26 | 32525 | 32653 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | MGYG000003742_9 | MGYG000003742_9_27 | 33097 | 34899 | - | GH13_6 |
| pfam | MGYG000003742_9 | MGYG000003742_9_28 | 35009 | 36598 | - | SusE | SusF_SusE |
| TC | MGYG000003742_9 | MGYG000003742_9_29 | 36626 | 38245 | - | 8.A.46.1.1 |
| TC | MGYG000003742_9 | MGYG000003742_9_30 | 38259 | 41258 | - | 1.B.14.6.1 |
| TF | MGYG000003742_9 | MGYG000003742_9_31 | 41599 | 42624 | + | LacI |
| TC | MGYG000003742_9 | MGYG000003742_9_32 | 42898 | 44214 | + | 2.A.2.6.2 |
| CAZyme | MGYG000003742_9 | MGYG000003742_9_33 | 44895 | 47600 | + | GH77 |
| CAZyme | MGYG000003742_9 | MGYG000003742_9_34 | 47670 | 49802 | + | GH97 |
| CAZyme | MGYG000003742_9 | MGYG000003742_9_35 | 49835 | 51796 | + | GH13_14 |
| CAZyme | MGYG000003742_9 | MGYG000003742_9_36 | 51809 | 53728 | + | GH13_46 |
Gene ID: MGYG000003742_9_25
Type: TC
Location: 30680 - 32305 (-)
Type: TC
Location: 30680 - 32305 (-)
Gene ID: MGYG000003742_9_26
Type:
Location: 32525 - 32653 (-)
Type:
Location: 32525 - 32653 (-)
Gene ID: MGYG000003742_9_27
Type: CAZyme
Location: 33097 - 34899 (-)
Type: CAZyme
Location: 33097 - 34899 (-)
Gene ID: MGYG000003742_9_28
Type: pfam
Location: 35009 - 36598 (-)
Type: pfam
Location: 35009 - 36598 (-)
Gene ID: MGYG000003742_9_29
Type: TC
Location: 36626 - 38245 (-)
Type: TC
Location: 36626 - 38245 (-)
Gene ID: MGYG000003742_9_30
Type: TC
Location: 38259 - 41258 (-)
Type: TC
Location: 38259 - 41258 (-)
Gene ID: MGYG000003742_9_31
Type: TF
Location: 41599 - 42624 (+)
Type: TF
Location: 41599 - 42624 (+)
Gene ID: MGYG000003742_9_32
Type: TC
Location: 42898 - 44214 (+)
Type: TC
Location: 42898 - 44214 (+)
Gene ID: MGYG000003742_9_33
Type: CAZyme
Location: 44895 - 47600 (+)
Type: CAZyme
Location: 44895 - 47600 (+)
Gene ID: MGYG000003742_9_34
Type: CAZyme
Location: 47670 - 49802 (+)
Type: CAZyme
Location: 47670 - 49802 (+)
Gene ID: MGYG000003742_9_35
Type: CAZyme
Location: 49835 - 51796 (+)
Type: CAZyme
Location: 49835 - 51796 (+)
Gene ID: MGYG000003742_9_36
Type: CAZyme
Location: 51809 - 53728 (+)
Type: CAZyme
Location: 51809 - 53728 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Prevotella
Species
Prevotella buccalis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.