Cluster: MGYG000003736_CGC9
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000003736
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000003736_13 | MGYG000003736_13_21 | 19852 | 20730 | + | 9.B.1.1.5 |
| TF | MGYG000003736_13 | MGYG000003736_13_22 | 20751 | 21812 | - | HTH_AraC |
| TC | MGYG000003736_13 | MGYG000003736_13_23 | 21809 | 23017 | - | 2.A.1.81.1 |
| pfam | MGYG000003736_13 | MGYG000003736_13_24 | 23122 | 26316 | - | p450 | NAD_binding_1 | Flavodoxin_1 | FAD_binding_1 |
| pfam | MGYG000003736_13 | MGYG000003736_13_25 | 26537 | 26953 | - | RF-1 |
| CAZyme | MGYG000003736_13 | MGYG000003736_13_26 | 26989 | 28380 | - | AA7 |
Gene ID: MGYG000003736_13_21
Type: TC
Location: 19852 - 20730 (+)
Type: TC
Location: 19852 - 20730 (+)
Gene ID: MGYG000003736_13_22
Type: TF
Location: 20751 - 21812 (-)
Type: TF
Location: 20751 - 21812 (-)
Gene ID: MGYG000003736_13_23
Type: TC
Location: 21809 - 23017 (-)
Type: TC
Location: 21809 - 23017 (-)
Gene ID: MGYG000003736_13_24
Type: pfam
Location: 23122 - 26316 (-)
Type: pfam
Location: 23122 - 26316 (-)
Gene ID: MGYG000003736_13_25
Type: pfam
Location: 26537 - 26953 (-)
Type: pfam
Location: 26537 - 26953 (-)
Gene ID: MGYG000003736_13_26
Type: CAZyme
Location: 26989 - 28380 (-)
Type: CAZyme
Location: 26989 - 28380 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Cupriavidus
Species
Cupriavidus metallidurans
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.