Cluster: MGYG000003733_CGC22
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000003733
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000003733_122 | MGYG000003733_122_12 | 10121 | 11092 | + | 2.A.80.1.3 |
| CAZyme | MGYG000003733_122 | MGYG000003733_122_13 | 11133 | 13397 | - | GH23 |
| pfam | MGYG000003733_122 | MGYG000003733_122_14 | 13699 | 14547 | + | SGL |
| NULL(UNKNOWN) | MGYG000003733_122 | MGYG000003733_122_15 | 14640 | 14777 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | MGYG000003733_122 | MGYG000003733_122_16 | 14886 | 16244 | - | 2.A.56.1.7 |
| pfam | MGYG000003733_122 | MGYG000003733_122_17 | 16241 | 16795 | - | DctQ |
| TC | MGYG000003733_122 | MGYG000003733_122_18 | 16792 | 17814 | - | 2.A.56.1.7 |
Gene ID: MGYG000003733_122_12
Type: TC
Location: 10121 - 11092 (+)
Type: TC
Location: 10121 - 11092 (+)
Gene ID: MGYG000003733_122_13
Type: CAZyme
Location: 11133 - 13397 (-)
Type: CAZyme
Location: 11133 - 13397 (-)
Gene ID: MGYG000003733_122_14
Type: pfam
Location: 13699 - 14547 (+)
Type: pfam
Location: 13699 - 14547 (+)
Gene ID: MGYG000003733_122_15
Type:
Location: 14640 - 14777 (+)
Type:
Location: 14640 - 14777 (+)
Gene ID: MGYG000003733_122_16
Type: TC
Location: 14886 - 16244 (-)
Type: TC
Location: 14886 - 16244 (-)
Gene ID: MGYG000003733_122_17
Type: pfam
Location: 16241 - 16795 (-)
Type: pfam
Location: 16241 - 16795 (-)
Gene ID: MGYG000003733_122_18
Type: TC
Location: 16792 - 17814 (-)
Type: TC
Location: 16792 - 17814 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhizobiales
Family
Xanthobacteraceae
Genus
Bradyrhizobium
Species
Bradyrhizobium sp003020075
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.