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Cluster: MGYG000003717_CGC20

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC MGYG000003717_23 MGYG000003717_23_15 13908 14567 - 3.A.1.3.18
TC MGYG000003717_23 MGYG000003717_23_16 14577 15254 - 3.A.1.3.16
TC MGYG000003717_23 MGYG000003717_23_17 15267 16061 - 3.A.1.3.16
TC MGYG000003717_23 MGYG000003717_23_18 16072 16830 - 3.A.1.3.9
pfam MGYG000003717_23 MGYG000003717_23_19 16951 19224 + DHH | DHHA1 | ssDNA-exonuc_C | RecJ_OB
NULL(UNKNOWN) MGYG000003717_23 MGYG000003717_23_20 19244 19414 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme MGYG000003717_23 MGYG000003717_23_21 19509 20156 + CBM50
pfam MGYG000003717_23 MGYG000003717_23_22 20658 22319 + Lactamase_B | RMMBL | Lactamase_B_2 | RNase_J_C | RNase_J_b_CASP
CAZyme MGYG000003717_23 MGYG000003717_23_23 22389 23168 + CE1
Gene ID: MGYG000003717_23_15
Type: TC
Location: 13908 - 14567 (-)
Gene ID: MGYG000003717_23_16
Type: TC
Location: 14577 - 15254 (-)
Gene ID: MGYG000003717_23_17
Type: TC
Location: 15267 - 16061 (-)
Gene ID: MGYG000003717_23_18
Type: TC
Location: 16072 - 16830 (-)
Gene ID: MGYG000003717_23_19
Type: pfam
Location: 16951 - 19224 (+)
Gene ID: MGYG000003717_23_20
Type:
Location: 19244 - 19414 (+)
Gene ID: MGYG000003717_23_21
Type: CAZyme
Location: 19509 - 20156 (+)
Gene ID: MGYG000003717_23_22
Type: pfam
Location: 20658 - 22319 (+)
Gene ID: MGYG000003717_23_23
Type: CAZyme
Location: 22389 - 23168 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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