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Cluster: MGYG000003717_CGC18

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC MGYG000003717_19 MGYG000003717_19_20 16546 17346 - 3.A.1.23.2
TC MGYG000003717_19 MGYG000003717_19_21 17333 18169 - 3.A.1.26.5
pfam MGYG000003717_19 MGYG000003717_19_22 18145 18939 - CbiQ
NULL(UNKNOWN) MGYG000003717_19 MGYG000003717_19_23 18936 19538 - NULL(UNKNOWN)
[View Structural Homologs]
TC MGYG000003717_19 MGYG000003717_19_24 19876 21396 - 3.A.1.12.8
TC MGYG000003717_19 MGYG000003717_19_25 21389 22117 - 3.A.1.12.8
pfam MGYG000003717_19 MGYG000003717_19_26 22132 22896 - SnoaL | SnoaL_2 | SnoaL_2
TF MGYG000003717_19 MGYG000003717_19_27 22900 23343 - MarR
TC MGYG000003717_19 MGYG000003717_19_28 23487 24758 - 9.B.67.1.2
CAZyme MGYG000003717_19 MGYG000003717_19_29 24812 26254 - GH13_18
TC MGYG000003717_19 MGYG000003717_19_30 26537 27370 - 3.A.1.1.28
TC MGYG000003717_19 MGYG000003717_19_31 27387 28259 - 3.A.1.1.28
TC MGYG000003717_19 MGYG000003717_19_32 28278 29528 - 3.A.1.1.28
CAZyme MGYG000003717_19 MGYG000003717_19_33 29563 31725 - GH36
Gene ID: MGYG000003717_19_20
Type: TC
Location: 16546 - 17346 (-)
Gene ID: MGYG000003717_19_21
Type: TC
Location: 17333 - 18169 (-)
Gene ID: MGYG000003717_19_22
Type: pfam
Location: 18145 - 18939 (-)
Gene ID: MGYG000003717_19_23
Type:
Location: 18936 - 19538 (-)
Gene ID: MGYG000003717_19_24
Type: TC
Location: 19876 - 21396 (-)
Gene ID: MGYG000003717_19_25
Type: TC
Location: 21389 - 22117 (-)
Gene ID: MGYG000003717_19_26
Type: pfam
Location: 22132 - 22896 (-)
Gene ID: MGYG000003717_19_27
Type: TF
Location: 22900 - 23343 (-)
Gene ID: MGYG000003717_19_28
Type: TC
Location: 23487 - 24758 (-)
Gene ID: MGYG000003717_19_29
Type: CAZyme
Location: 24812 - 26254 (-)
Gene ID: MGYG000003717_19_30
Type: TC
Location: 26537 - 27370 (-)
Gene ID: MGYG000003717_19_31
Type: TC
Location: 27387 - 28259 (-)
Gene ID: MGYG000003717_19_32
Type: TC
Location: 28278 - 29528 (-)
Gene ID: MGYG000003717_19_33
Type: CAZyme
Location: 29563 - 31725 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
MGYG000003717_19_21 vegetarian > omnivore 1.00088 0.02773

🧭 Explore Read Mapping of CGC

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