Cluster: MGYG000003715_CGC6
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate:
- Genome ID: MGYG000003715
- CGC Family ID: CGCFAM_01201
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000003715_4 | MGYG000003715_4_37 | 45266 | 46291 | + | GH177 |
| STP | MGYG000003715_4 | MGYG000003715_4_38 | 46648 | 47952 | + | SBP_bac_1 |
| TC | MGYG000003715_4 | MGYG000003715_4_39 | 47977 | 48900 | + | 3.A.1.1.7 |
| TC | MGYG000003715_4 | MGYG000003715_4_40 | 48915 | 49721 | + | 3.A.1.1.28 |
| CAZyme | MGYG000003715_4 | MGYG000003715_4_41 | 49817 | 51142 | + | GH29 |
| TF | MGYG000003715_4 | MGYG000003715_4_42 | 51350 | 52906 | - | HTH_AraC | HTH_AraC |
| TC | MGYG000003715_4 | MGYG000003715_4_43 | 52903 | 54693 | - | 8.A.59.2.1 |
Gene ID: MGYG000003715_4_37
Type: CAZyme
Location: 45266 - 46291 (+)
Type: CAZyme
Location: 45266 - 46291 (+)
Gene ID: MGYG000003715_4_38
Type: STP
Location: 46648 - 47952 (+)
Type: STP
Location: 46648 - 47952 (+)
Gene ID: MGYG000003715_4_39
Type: TC
Location: 47977 - 48900 (+)
Type: TC
Location: 47977 - 48900 (+)
Gene ID: MGYG000003715_4_40
Type: TC
Location: 48915 - 49721 (+)
Type: TC
Location: 48915 - 49721 (+)
Gene ID: MGYG000003715_4_41
Type: CAZyme
Location: 49817 - 51142 (+)
Type: CAZyme
Location: 49817 - 51142 (+)
Gene ID: MGYG000003715_4_42
Type: TF
Location: 51350 - 52906 (-)
Type: TF
Location: 51350 - 52906 (-)
Gene ID: MGYG000003715_4_43
Type: TC
Location: 52903 - 54693 (-)
Type: TC
Location: 52903 - 54693 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Luxibacter
Species
Luxibacter massiliensis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.