Cluster: MGYG000003715_CGC18
🧬 Cluster Details
- Gene Count: 13
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000003715
- CGC Family ID: CGCFAM_00131
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000003715_13 | MGYG000003715_13_35 | 38089 | 40626 | + | 9.B.74.1.1 |
| TC | MGYG000003715_13 | MGYG000003715_13_36 | 40735 | 42915 | + | 9.B.74.1.1 |
| NULL(UNKNOWN) | MGYG000003715_13 | MGYG000003715_13_37 | 42958 | 43260 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | MGYG000003715_13 | MGYG000003715_13_38 | 43374 | 43913 | + | 3.A.1.17.8 |
| pfam | MGYG000003715_13 | MGYG000003715_13_39 | 43906 | 44703 | + | BPD_transp_1 |
| CAZyme | MGYG000003715_13 | MGYG000003715_13_40 | 44754 | 46082 | - | GH4 |
| TC | MGYG000003715_13 | MGYG000003715_13_41 | 46195 | 48237 | - | 4.A.1.1.8 |
| TF | MGYG000003715_13 | MGYG000003715_13_42 | 48578 | 49351 | - | HTH_6 |
| TC | MGYG000003715_13 | MGYG000003715_13_43 | 49380 | 51365 | - | 1.B.52.2.2 |
| NULL(UNKNOWN) | MGYG000003715_13 | MGYG000003715_13_44 | 51600 | 54626 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| NULL(UNKNOWN) | MGYG000003715_13 | MGYG000003715_13_45 | 54753 | 55199 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | MGYG000003715_13 | MGYG000003715_13_46 | 55205 | 57157 | - | 1.B.52.2.2 |
| TC | MGYG000003715_13 | MGYG000003715_13_47 | 57419 | 58786 | - | 2.A.22.5.3 |
Gene ID: MGYG000003715_13_35
Type: TC
Location: 38089 - 40626 (+)
Type: TC
Location: 38089 - 40626 (+)
Gene ID: MGYG000003715_13_36
Type: TC
Location: 40735 - 42915 (+)
Type: TC
Location: 40735 - 42915 (+)
Gene ID: MGYG000003715_13_37
Type:
Location: 42958 - 43260 (-)
Type:
Location: 42958 - 43260 (-)
Gene ID: MGYG000003715_13_38
Type: TC
Location: 43374 - 43913 (+)
Type: TC
Location: 43374 - 43913 (+)
Gene ID: MGYG000003715_13_39
Type: pfam
Location: 43906 - 44703 (+)
Type: pfam
Location: 43906 - 44703 (+)
Gene ID: MGYG000003715_13_40
Type: CAZyme
Location: 44754 - 46082 (-)
Type: CAZyme
Location: 44754 - 46082 (-)
Gene ID: MGYG000003715_13_41
Type: TC
Location: 46195 - 48237 (-)
Type: TC
Location: 46195 - 48237 (-)
Gene ID: MGYG000003715_13_42
Type: TF
Location: 48578 - 49351 (-)
Type: TF
Location: 48578 - 49351 (-)
Gene ID: MGYG000003715_13_43
Type: TC
Location: 49380 - 51365 (-)
Type: TC
Location: 49380 - 51365 (-)
Gene ID: MGYG000003715_13_44
Type:
Location: 51600 - 54626 (-)
Type:
Location: 51600 - 54626 (-)
Gene ID: MGYG000003715_13_45
Type:
Location: 54753 - 55199 (-)
Type:
Location: 54753 - 55199 (-)
Gene ID: MGYG000003715_13_46
Type: TC
Location: 55205 - 57157 (-)
Type: TC
Location: 55205 - 57157 (-)
Gene ID: MGYG000003715_13_47
Type: TC
Location: 57419 - 58786 (-)
Type: TC
Location: 57419 - 58786 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Luxibacter
Species
Luxibacter massiliensis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.