Cluster: MGYG000003713_CGC5
🧬 Cluster Details
- Gene Count: 10
- CAZyme Count: 6
- Substrate:
- Genome ID: MGYG000003713
- CGC Family ID: CGCFAM_00076
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000003713_14 | MGYG000003713_14_10 | 8196 | 10001 | - | 9.B.18.2.1 |
| pfam | MGYG000003713_14 | MGYG000003713_14_11 | 10001 | 11098 | - | DegT_DnrJ_EryC1 |
| pfam | MGYG000003713_14 | MGYG000003713_14_12 | 11216 | 11815 | - | Hexapep | Hexapep | PglD_N |
| TC | MGYG000003713_14 | MGYG000003713_14_13 | 11802 | 12407 | - | 9.B.18.1.2 |
| CAZyme | MGYG000003713_14 | MGYG000003713_14_14 | 12400 | 13527 | - | GT4 |
| CAZyme | MGYG000003713_14 | MGYG000003713_14_15 | 13601 | 16381 | - | GT66 |
| CAZyme | MGYG000003713_14 | MGYG000003713_14_16 | 16384 | 17502 | - | GT4 |
| CAZyme | MGYG000003713_14 | MGYG000003713_14_17 | 17753 | 18796 | - | GT4 |
| CAZyme | MGYG000003713_14 | MGYG000003713_14_18 | 18793 | 20058 | - | GT2 |
| CAZyme | MGYG000003713_14 | MGYG000003713_14_19 | 20058 | 21137 | - | GT4 |
Gene ID: MGYG000003713_14_10
Type: TC
Location: 8196 - 10001 (-)
Type: TC
Location: 8196 - 10001 (-)
Gene ID: MGYG000003713_14_11
Type: pfam
Location: 10001 - 11098 (-)
Type: pfam
Location: 10001 - 11098 (-)
Gene ID: MGYG000003713_14_12
Type: pfam
Location: 11216 - 11815 (-)
Type: pfam
Location: 11216 - 11815 (-)
Gene ID: MGYG000003713_14_13
Type: TC
Location: 11802 - 12407 (-)
Type: TC
Location: 11802 - 12407 (-)
Gene ID: MGYG000003713_14_14
Type: CAZyme
Location: 12400 - 13527 (-)
Type: CAZyme
Location: 12400 - 13527 (-)
Gene ID: MGYG000003713_14_15
Type: CAZyme
Location: 13601 - 16381 (-)
Type: CAZyme
Location: 13601 - 16381 (-)
Gene ID: MGYG000003713_14_16
Type: CAZyme
Location: 16384 - 17502 (-)
Type: CAZyme
Location: 16384 - 17502 (-)
Gene ID: MGYG000003713_14_17
Type: CAZyme
Location: 17753 - 18796 (-)
Type: CAZyme
Location: 17753 - 18796 (-)
Gene ID: MGYG000003713_14_18
Type: CAZyme
Location: 18793 - 20058 (-)
Type: CAZyme
Location: 18793 - 20058 (-)
Gene ID: MGYG000003713_14_19
Type: CAZyme
Location: 20058 - 21137 (-)
Type: CAZyme
Location: 20058 - 21137 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Campylobacterota
Class
Campylobacteria
Order
Campylobacterales
Family
Campylobacteraceae
Genus
Campylobacter_B
Species
Campylobacter_B sp900539505
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.