Cluster: MGYG000003711_CGC7
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000003711
- CGC Family ID: CGCFAM_00007
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000003711_6 | MGYG000003711_6_56 | 52890 | 54314 | - | 2.A.73.1.1 |
| pfam | MGYG000003711_6 | MGYG000003711_6_57 | 54483 | 55376 | - | UbiA |
| TC | MGYG000003711_6 | MGYG000003711_6_58 | 55475 | 57688 | - | 8.A.3.3.2 |
| pfam | MGYG000003711_6 | MGYG000003711_6_59 | 58279 | 59445 | + | UDPG_MGDP_dh | NAD_Gly3P_dh_N | UDPG_MGDP_dh_C | UDPG_MGDP_dh_N |
| CAZyme | MGYG000003711_6 | MGYG000003711_6_60 | 59470 | 60564 | + | GT4 |
Gene ID: MGYG000003711_6_56
Type: TC
Location: 52890 - 54314 (-)
Type: TC
Location: 52890 - 54314 (-)
Gene ID: MGYG000003711_6_57
Type: pfam
Location: 54483 - 55376 (-)
Type: pfam
Location: 54483 - 55376 (-)
Gene ID: MGYG000003711_6_58
Type: TC
Location: 55475 - 57688 (-)
Type: TC
Location: 55475 - 57688 (-)
Gene ID: MGYG000003711_6_59
Type: pfam
Location: 58279 - 59445 (+)
Type: pfam
Location: 58279 - 59445 (+)
Gene ID: MGYG000003711_6_60
Type: CAZyme
Location: 59470 - 60564 (+)
Type: CAZyme
Location: 59470 - 60564 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Xanthomonadales
Family
Xanthomonadaceae
Genus
Stenotrophomonas
Species
Stenotrophomonas maltophilia_AQ
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.