Cluster: MGYG000003711_CGC3
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000003711
- CGC Family ID: CGCFAM_06241
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000003711_3 | MGYG000003711_3_24 | 31861 | 32865 | - | CE1 |
| TC | MGYG000003711_3 | MGYG000003711_3_25 | 33064 | 35262 | + | 1.B.14.8.6 |
| peptidase | MGYG000003711_3 | MGYG000003711_3_26 | 35295 | 36173 | + | S33.UPW |
| pfam | MGYG000003711_3 | MGYG000003711_3_27 | 36170 | 36655 | + | MaoC_dehydratas | FAS1_DH_region |
| TC | MGYG000003711_3 | MGYG000003711_3_28 | 36692 | 40027 | + | 2.A.21.9.2 |
| TF | MGYG000003711_3 | MGYG000003711_3_29 | 40032 | 40706 | - | GerE |
| TC | MGYG000003711_3 | MGYG000003711_3_30 | 40836 | 42470 | + | 4.C.1.1.7 |
Gene ID: MGYG000003711_3_24
Type: CAZyme
Location: 31861 - 32865 (-)
Type: CAZyme
Location: 31861 - 32865 (-)
Gene ID: MGYG000003711_3_25
Type: TC
Location: 33064 - 35262 (+)
Type: TC
Location: 33064 - 35262 (+)
Gene ID: MGYG000003711_3_26
Type: peptidase
Location: 35295 - 36173 (+)
Type: peptidase
Location: 35295 - 36173 (+)
Gene ID: MGYG000003711_3_27
Type: pfam
Location: 36170 - 36655 (+)
Type: pfam
Location: 36170 - 36655 (+)
Gene ID: MGYG000003711_3_28
Type: TC
Location: 36692 - 40027 (+)
Type: TC
Location: 36692 - 40027 (+)
Gene ID: MGYG000003711_3_29
Type: TF
Location: 40032 - 40706 (-)
Type: TF
Location: 40032 - 40706 (-)
Gene ID: MGYG000003711_3_30
Type: TC
Location: 40836 - 42470 (+)
Type: TC
Location: 40836 - 42470 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Xanthomonadales
Family
Xanthomonadaceae
Genus
Stenotrophomonas
Species
Stenotrophomonas maltophilia_AQ
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.