Cluster: MGYG000003711_CGC29
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000003711
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000003711_66 | MGYG000003711_66_2 | 1177 | 2220 | - | 8.A.59.2.1 |
| peptidase | MGYG000003711_66 | MGYG000003711_66_3 | 2224 | 2883 | - | S09.UPW |
| CAZyme | MGYG000003711_66 | MGYG000003711_66_4 | 2934 | 4859 | - | GT2 |
| TC | MGYG000003711_66 | MGYG000003711_66_5 | 5352 | 7397 | + | 1.B.14.1.4 |
| NULL(UNKNOWN) | MGYG000003711_66 | MGYG000003711_66_6 | 7458 | 7628 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | MGYG000003711_66 | MGYG000003711_66_7 | 7846 | 8232 | + | 1.E.55.2.3 |
Gene ID: MGYG000003711_66_2
Type: TC
Location: 1177 - 2220 (-)
Type: TC
Location: 1177 - 2220 (-)
Gene ID: MGYG000003711_66_3
Type: peptidase
Location: 2224 - 2883 (-)
Type: peptidase
Location: 2224 - 2883 (-)
Gene ID: MGYG000003711_66_4
Type: CAZyme
Location: 2934 - 4859 (-)
Type: CAZyme
Location: 2934 - 4859 (-)
Gene ID: MGYG000003711_66_5
Type: TC
Location: 5352 - 7397 (+)
Type: TC
Location: 5352 - 7397 (+)
Gene ID: MGYG000003711_66_6
Type:
Location: 7458 - 7628 (-)
Type:
Location: 7458 - 7628 (-)
Gene ID: MGYG000003711_66_7
Type: TC
Location: 7846 - 8232 (+)
Type: TC
Location: 7846 - 8232 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Xanthomonadales
Family
Xanthomonadaceae
Genus
Stenotrophomonas
Species
Stenotrophomonas maltophilia_AQ
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.