Cluster: MGYG000003711_CGC26
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000003711
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000003711_49 | MGYG000003711_49_10 | 10253 | 11803 | - | 2.A.15.1.3 |
| STP | MGYG000003711_49 | MGYG000003711_49_11 | 11974 | 12564 | + | TetR_N |
| sulfatase | MGYG000003711_49 | MGYG000003711_49_12 | 12603 | 14075 | + | S1_6 |
| CAZyme | MGYG000003711_49 | MGYG000003711_49_13 | 14175 | 15857 | + | AA3_2 |
| TC | MGYG000003711_49 | MGYG000003711_49_14 | 16048 | 17724 | + | 4.C.1.1.4 |
| pfam | MGYG000003711_49 | MGYG000003711_49_15 | 17926 | 18795 | + | ECH_1 | ECH_2 |
| STP | MGYG000003711_49 | MGYG000003711_49_16 | 18808 | 21531 | - | HATPase_c | HisKA | Response_reg |
| TC | MGYG000003711_49 | MGYG000003711_49_17 | 21533 | 22672 | - | 8.A.59.4.2 |
Gene ID: MGYG000003711_49_10
Type: TC
Location: 10253 - 11803 (-)
Type: TC
Location: 10253 - 11803 (-)
Gene ID: MGYG000003711_49_11
Type: STP
Location: 11974 - 12564 (+)
Type: STP
Location: 11974 - 12564 (+)
Gene ID: MGYG000003711_49_12
Type: sulfatase
Location: 12603 - 14075 (+)
Type: sulfatase
Location: 12603 - 14075 (+)
Gene ID: MGYG000003711_49_13
Type: CAZyme
Location: 14175 - 15857 (+)
Type: CAZyme
Location: 14175 - 15857 (+)
Gene ID: MGYG000003711_49_14
Type: TC
Location: 16048 - 17724 (+)
Type: TC
Location: 16048 - 17724 (+)
Gene ID: MGYG000003711_49_15
Type: pfam
Location: 17926 - 18795 (+)
Type: pfam
Location: 17926 - 18795 (+)
Gene ID: MGYG000003711_49_16
Type: STP
Location: 18808 - 21531 (-)
Type: STP
Location: 18808 - 21531 (-)
Gene ID: MGYG000003711_49_17
Type: TC
Location: 21533 - 22672 (-)
Type: TC
Location: 21533 - 22672 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Xanthomonadales
Family
Xanthomonadaceae
Genus
Stenotrophomonas
Species
Stenotrophomonas maltophilia_AQ
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.