Cluster: MGYG000003711_CGC25
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000003711
- CGC Family ID: CGCFAM_00572
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000003711_48 | MGYG000003711_48_6 | 5020 | 6285 | + | 3.A.7.5.1 |
| TC | MGYG000003711_48 | MGYG000003711_48_7 | 6300 | 7343 | + | 3.A.7.3.1 |
| CAZyme | MGYG000003711_48 | MGYG000003711_48_8 | 7347 | 8330 | + | GH23 |
| TC | MGYG000003711_48 | MGYG000003711_48_9 | 8404 | 8814 | + | 3.A.7.3.1 |
| pfam | MGYG000003711_48 | MGYG000003711_48_10 | 8849 | 9115 | + | VirB3 |
| TC | MGYG000003711_48 | MGYG000003711_48_11 | 9197 | 11635 | + | 3.A.7.2.1 |
Gene ID: MGYG000003711_48_6
Type: TC
Location: 5020 - 6285 (+)
Type: TC
Location: 5020 - 6285 (+)
Gene ID: MGYG000003711_48_7
Type: TC
Location: 6300 - 7343 (+)
Type: TC
Location: 6300 - 7343 (+)
Gene ID: MGYG000003711_48_8
Type: CAZyme
Location: 7347 - 8330 (+)
Type: CAZyme
Location: 7347 - 8330 (+)
Gene ID: MGYG000003711_48_9
Type: TC
Location: 8404 - 8814 (+)
Type: TC
Location: 8404 - 8814 (+)
Gene ID: MGYG000003711_48_10
Type: pfam
Location: 8849 - 9115 (+)
Type: pfam
Location: 8849 - 9115 (+)
Gene ID: MGYG000003711_48_11
Type: TC
Location: 9197 - 11635 (+)
Type: TC
Location: 9197 - 11635 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Xanthomonadales
Family
Xanthomonadaceae
Genus
Stenotrophomonas
Species
Stenotrophomonas maltophilia_AQ
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.