Cluster: MGYG000003711_CGC24
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000003711
- CGC Family ID: CGCFAM_05846
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000003711_44 | MGYG000003711_44_10 | 7467 | 9131 | + | 3.A.1.120.6 |
| pfam | MGYG000003711_44 | MGYG000003711_44_11 | 9377 | 10066 | + | OMP_b-brl |
| TC | MGYG000003711_44 | MGYG000003711_44_12 | 10130 | 11446 | + | 2.A.40.7.6 |
| pfam | MGYG000003711_44 | MGYG000003711_44_13 | 11450 | 12532 | + | DUF4434 |
| pfam | MGYG000003711_44 | MGYG000003711_44_14 | 12526 | 15363 | - | NfrA_C |
| CAZyme | MGYG000003711_44 | MGYG000003711_44_15 | 15360 | 17507 | - | GT2 |
Gene ID: MGYG000003711_44_10
Type: TC
Location: 7467 - 9131 (+)
Type: TC
Location: 7467 - 9131 (+)
Gene ID: MGYG000003711_44_11
Type: pfam
Location: 9377 - 10066 (+)
Type: pfam
Location: 9377 - 10066 (+)
Gene ID: MGYG000003711_44_12
Type: TC
Location: 10130 - 11446 (+)
Type: TC
Location: 10130 - 11446 (+)
Gene ID: MGYG000003711_44_13
Type: pfam
Location: 11450 - 12532 (+)
Type: pfam
Location: 11450 - 12532 (+)
Gene ID: MGYG000003711_44_14
Type: pfam
Location: 12526 - 15363 (-)
Type: pfam
Location: 12526 - 15363 (-)
Gene ID: MGYG000003711_44_15
Type: CAZyme
Location: 15360 - 17507 (-)
Type: CAZyme
Location: 15360 - 17507 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Xanthomonadales
Family
Xanthomonadaceae
Genus
Stenotrophomonas
Species
Stenotrophomonas maltophilia_AQ
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.