Cluster: MGYG000003711_CGC2
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 3
- Substrate:
- Genome ID: MGYG000003711
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000003711_2 | MGYG000003711_2_42 | 41003 | 42616 | + | GH13_23 |
| TC | MGYG000003711_2 | MGYG000003711_2_43 | 42815 | 45571 | - | 1.B.14.12.1 |
| CAZyme | MGYG000003711_2 | MGYG000003711_2_44 | 45788 | 47839 | - | GH97 |
| NULL(UNKNOWN) | MGYG000003711_2 | MGYG000003711_2_45 | 48076 | 50268 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | MGYG000003711_2 | MGYG000003711_2_46 | 50265 | 51752 | + | 2.A.2.6.3 |
| CAZyme | MGYG000003711_2 | MGYG000003711_2_47 | 51752 | 53467 | + | GH13_2 |
Gene ID: MGYG000003711_2_42
Type: CAZyme
Location: 41003 - 42616 (+)
Type: CAZyme
Location: 41003 - 42616 (+)
Gene ID: MGYG000003711_2_43
Type: TC
Location: 42815 - 45571 (-)
Type: TC
Location: 42815 - 45571 (-)
Gene ID: MGYG000003711_2_44
Type: CAZyme
Location: 45788 - 47839 (-)
Type: CAZyme
Location: 45788 - 47839 (-)
Gene ID: MGYG000003711_2_45
Type:
Location: 48076 - 50268 (+)
Type:
Location: 48076 - 50268 (+)
Gene ID: MGYG000003711_2_46
Type: TC
Location: 50265 - 51752 (+)
Type: TC
Location: 50265 - 51752 (+)
Gene ID: MGYG000003711_2_47
Type: CAZyme
Location: 51752 - 53467 (+)
Type: CAZyme
Location: 51752 - 53467 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Xanthomonadales
Family
Xanthomonadaceae
Genus
Stenotrophomonas
Species
Stenotrophomonas maltophilia_AQ
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.