Cluster: MGYG000003711_CGC18
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000003711
- CGC Family ID: CGCFAM_03816
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000003711_28 | MGYG000003711_28_29 | 24900 | 26834 | + | 3.A.16.1.1 |
| NULL(UNKNOWN) | MGYG000003711_28 | MGYG000003711_28_30 | 26937 | 27122 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | MGYG000003711_28 | MGYG000003711_28_31 | 27392 | 27967 | - | Thioredoxin | AhpC-TSA | Redoxin | Thioredoxin_8 |
| TC | MGYG000003711_28 | MGYG000003711_28_32 | 27964 | 29238 | - | 9.B.126.2.1 |
| CAZyme | MGYG000003711_28 | MGYG000003711_28_33 | 29316 | 29909 | + | AA6 |
Gene ID: MGYG000003711_28_29
Type: TC
Location: 24900 - 26834 (+)
Type: TC
Location: 24900 - 26834 (+)
Gene ID: MGYG000003711_28_30
Type:
Location: 26937 - 27122 (+)
Type:
Location: 26937 - 27122 (+)
Gene ID: MGYG000003711_28_31
Type: pfam
Location: 27392 - 27967 (-)
Type: pfam
Location: 27392 - 27967 (-)
Gene ID: MGYG000003711_28_32
Type: TC
Location: 27964 - 29238 (-)
Type: TC
Location: 27964 - 29238 (-)
Gene ID: MGYG000003711_28_33
Type: CAZyme
Location: 29316 - 29909 (+)
Type: CAZyme
Location: 29316 - 29909 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Xanthomonadales
Family
Xanthomonadaceae
Genus
Stenotrophomonas
Species
Stenotrophomonas maltophilia_AQ
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.