Cluster: MGYG000003711_CGC17
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: MGYG000003711
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000003711_24 | MGYG000003711_24_29 | 31410 | 32429 | - | GT2 |
| CAZyme | MGYG000003711_24 | MGYG000003711_24_30 | 32486 | 33235 | - | GT51 |
| pfam | MGYG000003711_24 | MGYG000003711_24_31 | 33313 | 34206 | + | HSP33 |
| NULL(UNKNOWN) | MGYG000003711_24 | MGYG000003711_24_32 | 34323 | 35171 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | MGYG000003711_24 | MGYG000003711_24_33 | 35553 | 38429 | + | 1.B.14.3.1 |
Gene ID: MGYG000003711_24_29
Type: CAZyme
Location: 31410 - 32429 (-)
Type: CAZyme
Location: 31410 - 32429 (-)
Gene ID: MGYG000003711_24_30
Type: CAZyme
Location: 32486 - 33235 (-)
Type: CAZyme
Location: 32486 - 33235 (-)
Gene ID: MGYG000003711_24_31
Type: pfam
Location: 33313 - 34206 (+)
Type: pfam
Location: 33313 - 34206 (+)
Gene ID: MGYG000003711_24_32
Type:
Location: 34323 - 35171 (+)
Type:
Location: 34323 - 35171 (+)
Gene ID: MGYG000003711_24_33
Type: TC
Location: 35553 - 38429 (+)
Type: TC
Location: 35553 - 38429 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Xanthomonadales
Family
Xanthomonadaceae
Genus
Stenotrophomonas
Species
Stenotrophomonas maltophilia_AQ
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.