Cluster: MGYG000003711_CGC13
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000003711
- CGC Family ID: CGCFAM_10448
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000003711_17 | MGYG000003711_17_15 | 15706 | 19305 | - | 2.A.21.9.2 |
| TF | MGYG000003711_17 | MGYG000003711_17_16 | 19381 | 20019 | + | GerE |
| NULL(UNKNOWN) | MGYG000003711_17 | MGYG000003711_17_17 | 20397 | 21167 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | MGYG000003711_17 | MGYG000003711_17_18 | 21279 | 23270 | + | GH23 |
| pfam | MGYG000003711_17 | MGYG000003711_17_19 | 23517 | 23924 | + | Rick_17kDa_Anti |
| pfam | MGYG000003711_17 | MGYG000003711_17_20 | 24054 | 25178 | + | APH |
| TC | MGYG000003711_17 | MGYG000003711_17_21 | 25454 | 27643 | + | 1.B.14.1.7 |
Gene ID: MGYG000003711_17_15
Type: TC
Location: 15706 - 19305 (-)
Type: TC
Location: 15706 - 19305 (-)
Gene ID: MGYG000003711_17_16
Type: TF
Location: 19381 - 20019 (+)
Type: TF
Location: 19381 - 20019 (+)
Gene ID: MGYG000003711_17_17
Type:
Location: 20397 - 21167 (+)
Type:
Location: 20397 - 21167 (+)
Gene ID: MGYG000003711_17_18
Type: CAZyme
Location: 21279 - 23270 (+)
Type: CAZyme
Location: 21279 - 23270 (+)
Gene ID: MGYG000003711_17_19
Type: pfam
Location: 23517 - 23924 (+)
Type: pfam
Location: 23517 - 23924 (+)
Gene ID: MGYG000003711_17_20
Type: pfam
Location: 24054 - 25178 (+)
Type: pfam
Location: 24054 - 25178 (+)
Gene ID: MGYG000003711_17_21
Type: TC
Location: 25454 - 27643 (+)
Type: TC
Location: 25454 - 27643 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Xanthomonadales
Family
Xanthomonadaceae
Genus
Stenotrophomonas
Species
Stenotrophomonas maltophilia_AQ
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.