Cluster: MGYG000003711_CGC10
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000003711
- CGC Family ID: CGCFAM_00009
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000003711_10 | MGYG000003711_10_12 | 10838 | 11626 | + | 3.A.1.103.1 |
| TC | MGYG000003711_10 | MGYG000003711_10_13 | 11616 | 12953 | + | 3.A.1.103.6 |
| pfam | MGYG000003711_10 | MGYG000003711_10_14 | 12943 | 13704 | + | MTS | NodS | MetW | Methyltransf_11 | Methyltransf_12 | Methyltransf_23 | Methyltransf_25 | Methyltransf_31 |
| CAZyme | MGYG000003711_10 | MGYG000003711_10_15 | 13697 | 15778 | + | GT2 |
Gene ID: MGYG000003711_10_12
Type: TC
Location: 10838 - 11626 (+)
Type: TC
Location: 10838 - 11626 (+)
Gene ID: MGYG000003711_10_13
Type: TC
Location: 11616 - 12953 (+)
Type: TC
Location: 11616 - 12953 (+)
Gene ID: MGYG000003711_10_14
Type: pfam
Location: 12943 - 13704 (+)
Type: pfam
Location: 12943 - 13704 (+)
Gene ID: MGYG000003711_10_15
Type: CAZyme
Location: 13697 - 15778 (+)
Type: CAZyme
Location: 13697 - 15778 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Xanthomonadales
Family
Xanthomonadaceae
Genus
Stenotrophomonas
Species
Stenotrophomonas maltophilia_AQ
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.