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Cluster: MGYG000003675_CGC18

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme MGYG000003675_120 MGYG000003675_120_1 2 862 + GT2
TC MGYG000003675_120 MGYG000003675_120_2 1030 2430 + 2.A.37.3.3
pfam MGYG000003675_120 MGYG000003675_120_3 2542 3381 + Patatin | DUF6363
pfam MGYG000003675_120 MGYG000003675_120_4 3430 3675 - Holin_SPP1
CAZyme MGYG000003675_120 MGYG000003675_120_5 3702 4316 - GH25
pfam MGYG000003675_120 MGYG000003675_120_6 4819 5976 + DUF348 | 3D | G5
CAZyme MGYG000003675_120 MGYG000003675_120_7 6263 8605 + CBM48 | GH13_9
pfam MGYG000003675_120 MGYG000003675_120_8 8689 9882 + NTP_transferase | Hexapep_GlmU
pfam MGYG000003675_120 MGYG000003675_120_9 9876 11003 + NTP_transferase | Hexapep_GlmU
CAZyme MGYG000003675_120 MGYG000003675_120_10 11134 12552 + GT5
Gene ID: MGYG000003675_120_1
Type: CAZyme
Location: 2 - 862 (+)
Gene ID: MGYG000003675_120_2
Type: TC
Location: 1030 - 2430 (+)
Gene ID: MGYG000003675_120_3
Type: pfam
Location: 2542 - 3381 (+)
Gene ID: MGYG000003675_120_4
Type: pfam
Location: 3430 - 3675 (-)
Gene ID: MGYG000003675_120_5
Type: CAZyme
Location: 3702 - 4316 (-)
Gene ID: MGYG000003675_120_6
Type: pfam
Location: 4819 - 5976 (+)
Gene ID: MGYG000003675_120_7
Type: CAZyme
Location: 6263 - 8605 (+)
Gene ID: MGYG000003675_120_8
Type: pfam
Location: 8689 - 9882 (+)
Gene ID: MGYG000003675_120_9
Type: pfam
Location: 9876 - 11003 (+)
Gene ID: MGYG000003675_120_10
Type: CAZyme
Location: 11134 - 12552 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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