Cluster: MGYG000003675_CGC13
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: MGYG000003675
- CGC Family ID: CGCFAM_00063
- Continent: South America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000003675_98 | MGYG000003675_98_1 | 1 | 978 | - | GT35 |
| TF | MGYG000003675_98 | MGYG000003675_98_2 | 1108 | 1965 | + | HTH_AraC |
| TF | MGYG000003675_98 | MGYG000003675_98_3 | 2020 | 3045 | - | LacI |
| TC | MGYG000003675_98 | MGYG000003675_98_4 | 3338 | 5536 | + | 4.A.1.1.11 |
| pfam | MGYG000003675_98 | MGYG000003675_98_5 | 5543 | 6361 | + | Exo_endo_phos |
| CAZyme | MGYG000003675_98 | MGYG000003675_98_6 | 6378 | 7880 | + | GH77 |
Gene ID: MGYG000003675_98_1
Type: CAZyme
Location: 1 - 978 (-)
Type: CAZyme
Location: 1 - 978 (-)
Gene ID: MGYG000003675_98_2
Type: TF
Location: 1108 - 1965 (+)
Type: TF
Location: 1108 - 1965 (+)
Gene ID: MGYG000003675_98_3
Type: TF
Location: 2020 - 3045 (-)
Type: TF
Location: 2020 - 3045 (-)
Gene ID: MGYG000003675_98_4
Type: TC
Location: 3338 - 5536 (+)
Type: TC
Location: 3338 - 5536 (+)
Gene ID: MGYG000003675_98_5
Type: pfam
Location: 5543 - 6361 (+)
Type: pfam
Location: 5543 - 6361 (+)
Gene ID: MGYG000003675_98_6
Type: CAZyme
Location: 6378 - 7880 (+)
Type: CAZyme
Location: 6378 - 7880 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Faecalibacterium
Species
Faecalibacterium sp900551435
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.