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Cluster: MGYG000003654_CGC8

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC MGYG000003654_11 MGYG000003654_11_29 31916 33196 + 9.B.146.1.3
pfam MGYG000003654_11 MGYG000003654_11_30 33226 33756 + Mur_ligase_C
TC MGYG000003654_11 MGYG000003654_11_31 33760 34962 + 2.A.103.1.3
CAZyme MGYG000003654_11 MGYG000003654_11_32 34919 36046 + GT28
pfam MGYG000003654_11 MGYG000003654_11_33 36031 37395 + Mur_ligase | Mur_ligase_C | Mur_ligase_M
NULL(UNKNOWN) MGYG000003654_11 MGYG000003654_11_34 37392 38129 + NULL(UNKNOWN)
[View Structural Homologs]
TC MGYG000003654_11 MGYG000003654_11_35 38129 39499 + 9.B.157.1.1
Gene ID: MGYG000003654_11_29
Type: TC
Location: 31916 - 33196 (+)
Gene ID: MGYG000003654_11_30
Type: pfam
Location: 33226 - 33756 (+)
Gene ID: MGYG000003654_11_31
Type: TC
Location: 33760 - 34962 (+)
Gene ID: MGYG000003654_11_32
Type: CAZyme
Location: 34919 - 36046 (+)
Gene ID: MGYG000003654_11_33
Type: pfam
Location: 36031 - 37395 (+)
Gene ID: MGYG000003654_11_34
Type:
Location: 37392 - 38129 (+)
Gene ID: MGYG000003654_11_35
Type: TC
Location: 38129 - 39499 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacteroidota
→
Class
Bacteroidia
→
Order
Bacteroidales
→
Family
F082
→
Genus
Limimorpha
→
Species
Limimorpha sp900542475

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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