Cluster: MGYG000003654_CGC17
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate:
- Genome ID: MGYG000003654
- CGC Family ID: CGCFAM_00281
- Continent: South America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000003654_29 | MGYG000003654_29_42 | 48071 | 50515 | + | 9.B.144.1.4 |
| CAZyme | MGYG000003654_29 | MGYG000003654_29_43 | 50512 | 51819 | + | GT4 |
| CAZyme | MGYG000003654_29 | MGYG000003654_29_44 | 51816 | 52940 | + | GT4 |
| pfam | MGYG000003654_29 | MGYG000003654_29_45 | 52930 | 53727 | - | LicD |
| pfam | MGYG000003654_29 | MGYG000003654_29_46 | 53727 | 54353 | - | TehB | Methyltransf_11 | Methyltransf_23 | Methyltransf_25 | Methyltransf_31 |
| TC | MGYG000003654_29 | MGYG000003654_29_47 | 54363 | 55259 | - | 3.A.2.1.2 |
| TC | MGYG000003654_29 | MGYG000003654_29_48 | 55265 | 56854 | - | 3.A.2.1.2 |
Gene ID: MGYG000003654_29_42
Type: TC
Location: 48071 - 50515 (+)
Type: TC
Location: 48071 - 50515 (+)
Gene ID: MGYG000003654_29_43
Type: CAZyme
Location: 50512 - 51819 (+)
Type: CAZyme
Location: 50512 - 51819 (+)
Gene ID: MGYG000003654_29_44
Type: CAZyme
Location: 51816 - 52940 (+)
Type: CAZyme
Location: 51816 - 52940 (+)
Gene ID: MGYG000003654_29_45
Type: pfam
Location: 52930 - 53727 (-)
Type: pfam
Location: 52930 - 53727 (-)
Gene ID: MGYG000003654_29_46
Type: pfam
Location: 53727 - 54353 (-)
Type: pfam
Location: 53727 - 54353 (-)
Gene ID: MGYG000003654_29_47
Type: TC
Location: 54363 - 55259 (-)
Type: TC
Location: 54363 - 55259 (-)
Gene ID: MGYG000003654_29_48
Type: TC
Location: 55265 - 56854 (-)
Type: TC
Location: 55265 - 56854 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
F082
Genus
Limimorpha
Species
Limimorpha sp900542475
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.