Cluster: MGYG000003654_CGC10
🧬 Cluster Details
- Gene Count: 11
- CAZyme Count: 4
- Substrate:
- Genome ID: MGYG000003654
- CGC Family ID: CGCFAM_00005
- Continent: South America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000003654_15 | MGYG000003654_15_22 | 29416 | 31122 | + | 1.B.23.4.2 |
| pfam | MGYG000003654_15 | MGYG000003654_15_23 | 31141 | 32046 | + | ATPgrasp_TupA |
| pfam | MGYG000003654_15 | MGYG000003654_15_24 | 32040 | 33251 | + | Octopine_DH |
| TC | MGYG000003654_15 | MGYG000003654_15_25 | 33251 | 34708 | + | 2.A.66.2.7 |
| CAZyme | MGYG000003654_15 | MGYG000003654_15_26 | 34705 | 35805 | + | GT4 |
| CAZyme | MGYG000003654_15 | MGYG000003654_15_27 | 35805 | 37124 | + | GT4 |
| CAZyme | MGYG000003654_15 | MGYG000003654_15_28 | 37090 | 37851 | + | GT2 |
| TC | MGYG000003654_15 | MGYG000003654_15_29 | 37864 | 39219 | + | 9.B.18.1.3 |
| CAZyme | MGYG000003654_15 | MGYG000003654_15_30 | 39223 | 39972 | + | GT2 |
| NULL(UNKNOWN) | MGYG000003654_15 | MGYG000003654_15_31 | 39969 | 40805 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | MGYG000003654_15 | MGYG000003654_15_32 | 40988 | 41572 | + | 9.B.18.1.3 |
Gene ID: MGYG000003654_15_22
Type: TC
Location: 29416 - 31122 (+)
Type: TC
Location: 29416 - 31122 (+)
Gene ID: MGYG000003654_15_23
Type: pfam
Location: 31141 - 32046 (+)
Type: pfam
Location: 31141 - 32046 (+)
Gene ID: MGYG000003654_15_24
Type: pfam
Location: 32040 - 33251 (+)
Type: pfam
Location: 32040 - 33251 (+)
Gene ID: MGYG000003654_15_25
Type: TC
Location: 33251 - 34708 (+)
Type: TC
Location: 33251 - 34708 (+)
Gene ID: MGYG000003654_15_26
Type: CAZyme
Location: 34705 - 35805 (+)
Type: CAZyme
Location: 34705 - 35805 (+)
Gene ID: MGYG000003654_15_27
Type: CAZyme
Location: 35805 - 37124 (+)
Type: CAZyme
Location: 35805 - 37124 (+)
Gene ID: MGYG000003654_15_28
Type: CAZyme
Location: 37090 - 37851 (+)
Type: CAZyme
Location: 37090 - 37851 (+)
Gene ID: MGYG000003654_15_29
Type: TC
Location: 37864 - 39219 (+)
Type: TC
Location: 37864 - 39219 (+)
Gene ID: MGYG000003654_15_30
Type: CAZyme
Location: 39223 - 39972 (+)
Type: CAZyme
Location: 39223 - 39972 (+)
Gene ID: MGYG000003654_15_31
Type:
Location: 39969 - 40805 (+)
Type:
Location: 39969 - 40805 (+)
Gene ID: MGYG000003654_15_32
Type: TC
Location: 40988 - 41572 (+)
Type: TC
Location: 40988 - 41572 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
F082
Genus
Limimorpha
Species
Limimorpha sp900542475
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.