Cluster: MGYG000003648_CGC28
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate:
- Genome ID: MGYG000003648
- CGC Family ID: CGCFAM_01989
- Continent: Oceania
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000003648_402 | MGYG000003648_402_11 | 9040 | 9954 | - | 3.A.1.1.29 |
| TC | MGYG000003648_402 | MGYG000003648_402_12 | 9966 | 10961 | - | 3.A.1.1.29 |
| TC | MGYG000003648_402 | MGYG000003648_402_13 | 11070 | 12803 | - | 3.A.1.1.29 |
| TF | MGYG000003648_402 | MGYG000003648_402_14 | 12986 | 14581 | - | HTH_AraC | HTH_AraC |
| TC | MGYG000003648_402 | MGYG000003648_402_15 | 14595 | 16343 | - | 9.B.33.1.1 |
| CAZyme | MGYG000003648_402 | MGYG000003648_402_16 | 16481 | 19405 | - | GH43_35 |
| CAZyme | MGYG000003648_402 | MGYG000003648_402_17 | 19405 | 22854 | - | CBM22 | CBM9 | GH10 |
Gene ID: MGYG000003648_402_11
Type: TC
Location: 9040 - 9954 (-)
Type: TC
Location: 9040 - 9954 (-)
Gene ID: MGYG000003648_402_12
Type: TC
Location: 9966 - 10961 (-)
Type: TC
Location: 9966 - 10961 (-)
Gene ID: MGYG000003648_402_13
Type: TC
Location: 11070 - 12803 (-)
Type: TC
Location: 11070 - 12803 (-)
Gene ID: MGYG000003648_402_14
Type: TF
Location: 12986 - 14581 (-)
Type: TF
Location: 12986 - 14581 (-)
Gene ID: MGYG000003648_402_15
Type: TC
Location: 14595 - 16343 (-)
Type: TC
Location: 14595 - 16343 (-)
Gene ID: MGYG000003648_402_16
Type: CAZyme
Location: 16481 - 19405 (-)
Type: CAZyme
Location: 16481 - 19405 (-)
Gene ID: MGYG000003648_402_17
Type: CAZyme
Location: 19405 - 22854 (-)
Type: CAZyme
Location: 19405 - 22854 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
NK4A136
Species
NK4A136 sp002314855
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.