Cluster: MGYG000003619_CGC34
🧬 Cluster Details
- Gene Count: 11
- CAZyme Count: 7
- Substrate:
- Genome ID: MGYG000003619
- CGC Family ID: CGCFAM_00287
- Continent: Oceania
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000003619_247 | MGYG000003619_247_19 | 21610 | 22560 | - | GT11 |
| CAZyme | MGYG000003619_247 | MGYG000003619_247_20 | 22609 | 23652 | - | GH105 |
| pfam | MGYG000003619_247 | MGYG000003619_247_21 | 23664 | 24866 | - | PS_pyruv_trans |
| CAZyme | MGYG000003619_247 | MGYG000003619_247_22 | 24877 | 25863 | - | GT2 |
| CAZyme | MGYG000003619_247 | MGYG000003619_247_23 | 25876 | 26742 | - | GT14 |
| CAZyme | MGYG000003619_247 | MGYG000003619_247_24 | 26766 | 27800 | - | GT2 |
| NULL(UNKNOWN) | MGYG000003619_247 | MGYG000003619_247_25 | 27790 | 28938 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | MGYG000003619_247 | MGYG000003619_247_26 | 28919 | 29860 | - | GT17 |
| pfam | MGYG000003619_247 | MGYG000003619_247_27 | 29857 | 30618 | - | DUF5672 |
| CAZyme | MGYG000003619_247 | MGYG000003619_247_28 | 30632 | 31669 | - | GT11 |
| TC | MGYG000003619_247 | MGYG000003619_247_29 | 31710 | 32054 | - | 3.A.1.117.2 |
Gene ID: MGYG000003619_247_19
Type: CAZyme
Location: 21610 - 22560 (-)
Type: CAZyme
Location: 21610 - 22560 (-)
Gene ID: MGYG000003619_247_20
Type: CAZyme
Location: 22609 - 23652 (-)
Type: CAZyme
Location: 22609 - 23652 (-)
Gene ID: MGYG000003619_247_21
Type: pfam
Location: 23664 - 24866 (-)
Type: pfam
Location: 23664 - 24866 (-)
Gene ID: MGYG000003619_247_22
Type: CAZyme
Location: 24877 - 25863 (-)
Type: CAZyme
Location: 24877 - 25863 (-)
Gene ID: MGYG000003619_247_23
Type: CAZyme
Location: 25876 - 26742 (-)
Type: CAZyme
Location: 25876 - 26742 (-)
Gene ID: MGYG000003619_247_24
Type: CAZyme
Location: 26766 - 27800 (-)
Type: CAZyme
Location: 26766 - 27800 (-)
Gene ID: MGYG000003619_247_25
Type:
Location: 27790 - 28938 (-)
Type:
Location: 27790 - 28938 (-)
Gene ID: MGYG000003619_247_26
Type: CAZyme
Location: 28919 - 29860 (-)
Type: CAZyme
Location: 28919 - 29860 (-)
Gene ID: MGYG000003619_247_27
Type: pfam
Location: 29857 - 30618 (-)
Type: pfam
Location: 29857 - 30618 (-)
Gene ID: MGYG000003619_247_28
Type: CAZyme
Location: 30632 - 31669 (-)
Type: CAZyme
Location: 30632 - 31669 (-)
Gene ID: MGYG000003619_247_29
Type: TC
Location: 31710 - 32054 (-)
Type: TC
Location: 31710 - 32054 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
SFDP01
Species
SFDP01 sp900770785
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.