Cluster: MGYG000003619_CGC31
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000003619
- CGC Family ID: CGCFAM_10969
- Continent: Oceania
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000003619_245 | MGYG000003619_245_16 | 20346 | 21782 | - | GH29 |
| STP | MGYG000003619_245 | MGYG000003619_245_17 | 21898 | 22812 | - | GGDEF |
| TC | MGYG000003619_245 | MGYG000003619_245_18 | 23037 | 24668 | + | 3.A.1.121.4 |
| pfam | MGYG000003619_245 | MGYG000003619_245_19 | 24707 | 25591 | + | PHP |
| pfam | MGYG000003619_245 | MGYG000003619_245_20 | 25643 | 26455 | + | S6PP | S6PP | Hydrolase_3 |
| TC | MGYG000003619_245 | MGYG000003619_245_21 | 26470 | 27576 | - | 1.B.52.2.1 |
Gene ID: MGYG000003619_245_16
Type: CAZyme
Location: 20346 - 21782 (-)
Type: CAZyme
Location: 20346 - 21782 (-)
Gene ID: MGYG000003619_245_17
Type: STP
Location: 21898 - 22812 (-)
Type: STP
Location: 21898 - 22812 (-)
Gene ID: MGYG000003619_245_18
Type: TC
Location: 23037 - 24668 (+)
Type: TC
Location: 23037 - 24668 (+)
Gene ID: MGYG000003619_245_19
Type: pfam
Location: 24707 - 25591 (+)
Type: pfam
Location: 24707 - 25591 (+)
Gene ID: MGYG000003619_245_20
Type: pfam
Location: 25643 - 26455 (+)
Type: pfam
Location: 25643 - 26455 (+)
Gene ID: MGYG000003619_245_21
Type: TC
Location: 26470 - 27576 (-)
Type: TC
Location: 26470 - 27576 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
SFDP01
Species
SFDP01 sp900770785
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.