Cluster: MGYG000003619_CGC3
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000003619
- CGC Family ID: CGCFAM_07010
- Continent: Oceania
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000003619_8 | MGYG000003619_8_23 | 22689 | 24470 | - | 1.B.52.2.1 |
| pfam | MGYG000003619_8 | MGYG000003619_8_24 | 24599 | 25987 | - | Mur_ligase | Mur_ligase_C | Mur_ligase_M |
| pfam | MGYG000003619_8 | MGYG000003619_8_25 | 26034 | 27056 | - | Dala_Dala_lig_N | ATP-grasp_3 | CPSase_L_D2 | Dala_Dala_lig_C | ATP-grasp_4 |
| CAZyme | MGYG000003619_8 | MGYG000003619_8_26 | 27084 | 28493 | - | GH9 |
Gene ID: MGYG000003619_8_23
Type: TC
Location: 22689 - 24470 (-)
Type: TC
Location: 22689 - 24470 (-)
Gene ID: MGYG000003619_8_24
Type: pfam
Location: 24599 - 25987 (-)
Type: pfam
Location: 24599 - 25987 (-)
Gene ID: MGYG000003619_8_25
Type: pfam
Location: 26034 - 27056 (-)
Type: pfam
Location: 26034 - 27056 (-)
Gene ID: MGYG000003619_8_26
Type: CAZyme
Location: 27084 - 28493 (-)
Type: CAZyme
Location: 27084 - 28493 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
SFDP01
Species
SFDP01 sp900770785
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.