Cluster: MGYG000003619_CGC23
🧬 Cluster Details
- Gene Count: 12
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000003619
- Continent: Oceania
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000003619_190 | MGYG000003619_190_3 | 1711 | 3069 | - | GT2 |
| NULL(UNKNOWN) | MGYG000003619_190 | MGYG000003619_190_4 | 3284 | 3502 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | MGYG000003619_190 | MGYG000003619_190_5 | 3535 | 5247 | + | 9.B.33.1.1 |
| TF | MGYG000003619_190 | MGYG000003619_190_6 | 5316 | 6062 | + | LytTR |
| TC | MGYG000003619_190 | MGYG000003619_190_7 | 6206 | 7648 | + | 2.A.114.1.4 |
| TF | MGYG000003619_190 | MGYG000003619_190_8 | 7856 | 7966 | - | 0043707 |
| TC | MGYG000003619_190 | MGYG000003619_190_9 | 8114 | 8527 | - | 2.A.7.2.1 |
| NULL(UNKNOWN) | MGYG000003619_190 | MGYG000003619_190_10 | 8681 | 9187 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | MGYG000003619_190 | MGYG000003619_190_11 | 9201 | 9845 | - | 3.A.1.149.1 |
| TF | MGYG000003619_190 | MGYG000003619_190_12 | 9896 | 10267 | - | GntR |
| NULL(UNKNOWN) | MGYG000003619_190 | MGYG000003619_190_13 | 10267 | 10923 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | MGYG000003619_190 | MGYG000003619_190_14 | 10892 | 11770 | - | 3.A.1.146.2 |
Gene ID: MGYG000003619_190_3
Type: CAZyme
Location: 1711 - 3069 (-)
Type: CAZyme
Location: 1711 - 3069 (-)
Gene ID: MGYG000003619_190_4
Type:
Location: 3284 - 3502 (+)
Type:
Location: 3284 - 3502 (+)
Gene ID: MGYG000003619_190_5
Type: TC
Location: 3535 - 5247 (+)
Type: TC
Location: 3535 - 5247 (+)
Gene ID: MGYG000003619_190_6
Type: TF
Location: 5316 - 6062 (+)
Type: TF
Location: 5316 - 6062 (+)
Gene ID: MGYG000003619_190_7
Type: TC
Location: 6206 - 7648 (+)
Type: TC
Location: 6206 - 7648 (+)
Gene ID: MGYG000003619_190_8
Type: TF
Location: 7856 - 7966 (-)
Type: TF
Location: 7856 - 7966 (-)
Gene ID: MGYG000003619_190_9
Type: TC
Location: 8114 - 8527 (-)
Type: TC
Location: 8114 - 8527 (-)
Gene ID: MGYG000003619_190_10
Type:
Location: 8681 - 9187 (-)
Type:
Location: 8681 - 9187 (-)
Gene ID: MGYG000003619_190_11
Type: TC
Location: 9201 - 9845 (-)
Type: TC
Location: 9201 - 9845 (-)
Gene ID: MGYG000003619_190_12
Type: TF
Location: 9896 - 10267 (-)
Type: TF
Location: 9896 - 10267 (-)
Gene ID: MGYG000003619_190_13
Type:
Location: 10267 - 10923 (-)
Type:
Location: 10267 - 10923 (-)
Gene ID: MGYG000003619_190_14
Type: TC
Location: 10892 - 11770 (-)
Type: TC
Location: 10892 - 11770 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
SFDP01
Species
SFDP01 sp900770785
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.