Cluster: MGYG000003619_CGC22
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: MGYG000003619
- CGC Family ID: CGCFAM_00070
- Continent: Oceania
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000003619_189 | MGYG000003619_189_19 | 19718 | 20788 | + | GT4 |
| CAZyme | MGYG000003619_189 | MGYG000003619_189_20 | 20828 | 21775 | + | GT2 |
| pfam | MGYG000003619_189 | MGYG000003619_189_21 | 21791 | 24148 | + | PTPS_related |
| pfam | MGYG000003619_189 | MGYG000003619_189_22 | 24150 | 26060 | + | DUF6020 |
| TC | MGYG000003619_189 | MGYG000003619_189_23 | 26135 | 27667 | + | 2.A.50.2.1 |
Gene ID: MGYG000003619_189_19
Type: CAZyme
Location: 19718 - 20788 (+)
Type: CAZyme
Location: 19718 - 20788 (+)
Gene ID: MGYG000003619_189_20
Type: CAZyme
Location: 20828 - 21775 (+)
Type: CAZyme
Location: 20828 - 21775 (+)
Gene ID: MGYG000003619_189_21
Type: pfam
Location: 21791 - 24148 (+)
Type: pfam
Location: 21791 - 24148 (+)
Gene ID: MGYG000003619_189_22
Type: pfam
Location: 24150 - 26060 (+)
Type: pfam
Location: 24150 - 26060 (+)
Gene ID: MGYG000003619_189_23
Type: TC
Location: 26135 - 27667 (+)
Type: TC
Location: 26135 - 27667 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
SFDP01
Species
SFDP01 sp900770785
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.