Cluster: MGYG000003619_CGC13
🧬 Cluster Details
- Gene Count: 16
- CAZyme Count: 7
- Substrate:
- Genome ID: MGYG000003619
- CGC Family ID: CGCFAM_00168
- Continent: Oceania
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000003619_101 | MGYG000003619_101_45 | 46014 | 46949 | - | GT2 |
| pfam | MGYG000003619_101 | MGYG000003619_101_46 | 47006 | 48106 | - | LytR_cpsA_psr |
| TC | MGYG000003619_101 | MGYG000003619_101_47 | 48151 | 49554 | - | 9.B.18.1.1 |
| CAZyme | MGYG000003619_101 | MGYG000003619_101_48 | 49621 | 50589 | - | GT2 |
| CAZyme | MGYG000003619_101 | MGYG000003619_101_49 | 50613 | 51935 | - | GT2 |
| pfam | MGYG000003619_101 | MGYG000003619_101_50 | 51997 | 53718 | - | PGM_PMM_I | PGM_PMM_II | PGM_PMM_III |
| CAZyme | MGYG000003619_101 | MGYG000003619_101_51 | 53803 | 55773 | - | GT2 | GT2 |
| CAZyme | MGYG000003619_101 | MGYG000003619_101_52 | 55796 | 57841 | - | GT2 |
| pfam | MGYG000003619_101 | MGYG000003619_101_53 | 57826 | 59967 | - | RrnaAD | PCMT | CMAS | Methyltransf_11 | Methyltransf_12 | Methyltransf_23 | Methyltransf_25 |
| TC | MGYG000003619_101 | MGYG000003619_101_54 | 59967 | 61304 | - | 3.A.1.103.6 |
| TC | MGYG000003619_101 | MGYG000003619_101_55 | 61323 | 62318 | - | 3.A.1.104.1 |
| pfam | MGYG000003619_101 | MGYG000003619_101_56 | 62331 | 62924 | - | dTDP_sugar_isom |
| CAZyme | MGYG000003619_101 | MGYG000003619_101_57 | 62943 | 64196 | - | GH25 |
| pfam | MGYG000003619_101 | MGYG000003619_101_58 | 64186 | 65061 | - | NTP_transferase | NTP_transf_3 |
| pfam | MGYG000003619_101 | MGYG000003619_101_59 | 65074 | 66156 | - | 3Beta_HSD | Epimerase | Polysacc_synt_2 | RmlD_sub_bind | NAD_binding_4 | GDP_Man_Dehyd |
| CAZyme | MGYG000003619_101 | MGYG000003619_101_60 | 66277 | 69225 | - | GH25 |
Gene ID: MGYG000003619_101_45
Type: CAZyme
Location: 46014 - 46949 (-)
Type: CAZyme
Location: 46014 - 46949 (-)
Gene ID: MGYG000003619_101_46
Type: pfam
Location: 47006 - 48106 (-)
Type: pfam
Location: 47006 - 48106 (-)
Gene ID: MGYG000003619_101_47
Type: TC
Location: 48151 - 49554 (-)
Type: TC
Location: 48151 - 49554 (-)
Gene ID: MGYG000003619_101_48
Type: CAZyme
Location: 49621 - 50589 (-)
Type: CAZyme
Location: 49621 - 50589 (-)
Gene ID: MGYG000003619_101_49
Type: CAZyme
Location: 50613 - 51935 (-)
Type: CAZyme
Location: 50613 - 51935 (-)
Gene ID: MGYG000003619_101_50
Type: pfam
Location: 51997 - 53718 (-)
Type: pfam
Location: 51997 - 53718 (-)
Gene ID: MGYG000003619_101_51
Type: CAZyme
Location: 53803 - 55773 (-)
Type: CAZyme
Location: 53803 - 55773 (-)
Gene ID: MGYG000003619_101_52
Type: CAZyme
Location: 55796 - 57841 (-)
Type: CAZyme
Location: 55796 - 57841 (-)
Gene ID: MGYG000003619_101_53
Type: pfam
Location: 57826 - 59967 (-)
Type: pfam
Location: 57826 - 59967 (-)
Gene ID: MGYG000003619_101_54
Type: TC
Location: 59967 - 61304 (-)
Type: TC
Location: 59967 - 61304 (-)
Gene ID: MGYG000003619_101_55
Type: TC
Location: 61323 - 62318 (-)
Type: TC
Location: 61323 - 62318 (-)
Gene ID: MGYG000003619_101_56
Type: pfam
Location: 62331 - 62924 (-)
Type: pfam
Location: 62331 - 62924 (-)
Gene ID: MGYG000003619_101_57
Type: CAZyme
Location: 62943 - 64196 (-)
Type: CAZyme
Location: 62943 - 64196 (-)
Gene ID: MGYG000003619_101_58
Type: pfam
Location: 64186 - 65061 (-)
Type: pfam
Location: 64186 - 65061 (-)
Gene ID: MGYG000003619_101_59
Type: pfam
Location: 65074 - 66156 (-)
Type: pfam
Location: 65074 - 66156 (-)
Gene ID: MGYG000003619_101_60
Type: CAZyme
Location: 66277 - 69225 (-)
Type: CAZyme
Location: 66277 - 69225 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
SFDP01
Species
SFDP01 sp900770785
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.