Cluster: MGYG000003619_CGC10
🧬 Cluster Details
- Gene Count: 12
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000003619
- CGC Family ID: CGCFAM_08339
- Continent: Oceania
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000003619_71 | MGYG000003619_71_41 | 41317 | 42231 | + | 2.A.7.3.52 |
| TC | MGYG000003619_71 | MGYG000003619_71_42 | 42384 | 42740 | + | 9.A.11.1.1 |
| TC | MGYG000003619_71 | MGYG000003619_71_43 | 42843 | 45209 | + | 9.A.8.1.6 |
| pfam | MGYG000003619_71 | MGYG000003619_71_44 | 45260 | 45850 | + | DUF1653 |
| TF | MGYG000003619_71 | MGYG000003619_71_45 | 45888 | 47696 | + | SfsA |
| CAZyme | MGYG000003619_71 | MGYG000003619_71_46 | 47693 | 48718 | + | GT2 |
| pfam | MGYG000003619_71 | MGYG000003619_71_47 | 48889 | 49785 | + | PBP_like | PBP_like_2 | SBP_bac_11 |
| TC | MGYG000003619_71 | MGYG000003619_71_48 | 49879 | 50808 | + | 3.A.1.7.5 |
| TC | MGYG000003619_71 | MGYG000003619_71_49 | 50821 | 51705 | + | 3.A.1.7.5 |
| TC | MGYG000003619_71 | MGYG000003619_71_50 | 51686 | 52444 | + | 3.A.1.7.5 |
| pfam | MGYG000003619_71 | MGYG000003619_71_51 | 52490 | 53137 | + | PhoU | PhoU |
| TC | MGYG000003619_71 | MGYG000003619_71_52 | 53370 | 55142 | + | 2.A.58.2.2 |
Gene ID: MGYG000003619_71_41
Type: TC
Location: 41317 - 42231 (+)
Type: TC
Location: 41317 - 42231 (+)
Gene ID: MGYG000003619_71_42
Type: TC
Location: 42384 - 42740 (+)
Type: TC
Location: 42384 - 42740 (+)
Gene ID: MGYG000003619_71_43
Type: TC
Location: 42843 - 45209 (+)
Type: TC
Location: 42843 - 45209 (+)
Gene ID: MGYG000003619_71_44
Type: pfam
Location: 45260 - 45850 (+)
Type: pfam
Location: 45260 - 45850 (+)
Gene ID: MGYG000003619_71_45
Type: TF
Location: 45888 - 47696 (+)
Type: TF
Location: 45888 - 47696 (+)
Gene ID: MGYG000003619_71_46
Type: CAZyme
Location: 47693 - 48718 (+)
Type: CAZyme
Location: 47693 - 48718 (+)
Gene ID: MGYG000003619_71_47
Type: pfam
Location: 48889 - 49785 (+)
Type: pfam
Location: 48889 - 49785 (+)
Gene ID: MGYG000003619_71_48
Type: TC
Location: 49879 - 50808 (+)
Type: TC
Location: 49879 - 50808 (+)
Gene ID: MGYG000003619_71_49
Type: TC
Location: 50821 - 51705 (+)
Type: TC
Location: 50821 - 51705 (+)
Gene ID: MGYG000003619_71_50
Type: TC
Location: 51686 - 52444 (+)
Type: TC
Location: 51686 - 52444 (+)
Gene ID: MGYG000003619_71_51
Type: pfam
Location: 52490 - 53137 (+)
Type: pfam
Location: 52490 - 53137 (+)
Gene ID: MGYG000003619_71_52
Type: TC
Location: 53370 - 55142 (+)
Type: TC
Location: 53370 - 55142 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
SFDP01
Species
SFDP01 sp900770785
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.