Cluster: MGYG000003617_CGC4
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000003617
- CGC Family ID: CGCFAM_00005
- Continent: Oceania
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000003617_64 | MGYG000003617_64_21 | 24245 | 26284 | + | GT4 |
| pfam | MGYG000003617_64 | MGYG000003617_64_22 | 26775 | 28418 | - | HypF_C_2 |
| TC | MGYG000003617_64 | MGYG000003617_64_23 | 28418 | 28954 | - | 3.D.7.2.3 |
Gene ID: MGYG000003617_64_21
Type: CAZyme
Location: 24245 - 26284 (+)
Type: CAZyme
Location: 24245 - 26284 (+)
Gene ID: MGYG000003617_64_22
Type: pfam
Location: 26775 - 28418 (-)
Type: pfam
Location: 26775 - 28418 (-)
Gene ID: MGYG000003617_64_23
Type: TC
Location: 28418 - 28954 (-)
Type: TC
Location: 28418 - 28954 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Campylobacterota
Class
Campylobacteria
Order
Campylobacterales
Family
Helicobacteraceae
Genus
Helicobacter_D
Species
Helicobacter_D sp900770765
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.