Cluster: MGYG000003617_CGC3
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000003617
- CGC Family ID: CGCFAM_05109
- Continent: Oceania
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000003617_57 | MGYG000003617_57_18 | 14785 | 16008 | + | 2.A.36.6.4 |
| pfam | MGYG000003617_57 | MGYG000003617_57_19 | 16014 | 16844 | - | PseudoU_synth_2 |
| CAZyme | MGYG000003617_57 | MGYG000003617_57_20 | 16847 | 18070 | - | GT30 |
Gene ID: MGYG000003617_57_18
Type: TC
Location: 14785 - 16008 (+)
Type: TC
Location: 14785 - 16008 (+)
Gene ID: MGYG000003617_57_19
Type: pfam
Location: 16014 - 16844 (-)
Type: pfam
Location: 16014 - 16844 (-)
Gene ID: MGYG000003617_57_20
Type: CAZyme
Location: 16847 - 18070 (-)
Type: CAZyme
Location: 16847 - 18070 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Campylobacterota
Class
Campylobacteria
Order
Campylobacterales
Family
Helicobacteraceae
Genus
Helicobacter_D
Species
Helicobacter_D sp900770765
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.