dbCAN Logo

Cluster: MGYG000003613_CGC8

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC MGYG000003613_44 MGYG000003613_44_21 18972 21323 + 9.A.8.1.6
pfam MGYG000003613_44 MGYG000003613_44_22 21439 22017 + DUF1653
TF MGYG000003613_44 MGYG000003613_44_23 22033 23802 + SfsA
CAZyme MGYG000003613_44 MGYG000003613_44_24 23816 24841 + GT2
pfam MGYG000003613_44 MGYG000003613_44_25 25001 25906 + PBP_like | PBP_like_2 | SBP_bac_11
TC MGYG000003613_44 MGYG000003613_44_26 25920 26855 + 3.A.1.7.5
TC MGYG000003613_44 MGYG000003613_44_27 26852 27712 + 3.A.1.7.5
TC MGYG000003613_44 MGYG000003613_44_28 27699 28451 + 3.A.1.7.5
pfam MGYG000003613_44 MGYG000003613_44_29 28520 29167 + PhoU | PhoU
TC MGYG000003613_44 MGYG000003613_44_30 29295 31067 + 2.A.58.2.2
Gene ID: MGYG000003613_44_21
Type: TC
Location: 18972 - 21323 (+)
Gene ID: MGYG000003613_44_22
Type: pfam
Location: 21439 - 22017 (+)
Gene ID: MGYG000003613_44_23
Type: TF
Location: 22033 - 23802 (+)
Gene ID: MGYG000003613_44_24
Type: CAZyme
Location: 23816 - 24841 (+)
Gene ID: MGYG000003613_44_25
Type: pfam
Location: 25001 - 25906 (+)
Gene ID: MGYG000003613_44_26
Type: TC
Location: 25920 - 26855 (+)
Gene ID: MGYG000003613_44_27
Type: TC
Location: 26852 - 27712 (+)
Gene ID: MGYG000003613_44_28
Type: TC
Location: 27699 - 28451 (+)
Gene ID: MGYG000003613_44_29
Type: pfam
Location: 28520 - 29167 (+)
Gene ID: MGYG000003613_44_30
Type: TC
Location: 29295 - 31067 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_A
→
Class
Clostridia
→
Order
Lachnospirales
→
Family
Lachnospiraceae
→
Genus
SFDP01
→
Species
SFDP01 sp004558185

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List