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Cluster: MGYG000003613_CGC5

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme MGYG000003613_33 MGYG000003613_33_4 3105 4433 - GH29
pfam MGYG000003613_33 MGYG000003613_33_5 4516 5760 - GFO_IDH_MocA | GFO_IDH_MocA_C | GFO_IDH_MocA_C3
TC MGYG000003613_33 MGYG000003613_33_6 5850 6719 - 3.A.1.1.47
TC MGYG000003613_33 MGYG000003613_33_7 6797 7711 - 3.A.1.1.47
TC MGYG000003613_33 MGYG000003613_33_8 7816 9162 - 3.A.1.1.47
STP MGYG000003613_33 MGYG000003613_33_9 9290 10525 - SBP_bac_1 | SBP_bac_1
TF MGYG000003613_33 MGYG000003613_33_10 10557 11324 - HTH_AraC | HTH_AraC
TC MGYG000003613_33 MGYG000003613_33_11 11296 13062 - 8.A.59.2.1
TC MGYG000003613_33 MGYG000003613_33_12 13384 15459 - 3.A.3.32.3
Gene ID: MGYG000003613_33_4
Type: CAZyme
Location: 3105 - 4433 (-)
Gene ID: MGYG000003613_33_5
Type: pfam
Location: 4516 - 5760 (-)
Gene ID: MGYG000003613_33_6
Type: TC
Location: 5850 - 6719 (-)
Gene ID: MGYG000003613_33_7
Type: TC
Location: 6797 - 7711 (-)
Gene ID: MGYG000003613_33_8
Type: TC
Location: 7816 - 9162 (-)
Gene ID: MGYG000003613_33_9
Type: STP
Location: 9290 - 10525 (-)
Gene ID: MGYG000003613_33_10
Type: TF
Location: 10557 - 11324 (-)
Gene ID: MGYG000003613_33_11
Type: TC
Location: 11296 - 13062 (-)
Gene ID: MGYG000003613_33_12
Type: TC
Location: 13384 - 15459 (-)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_A
→
Class
Clostridia
→
Order
Lachnospirales
→
Family
Lachnospiraceae
→
Genus
SFDP01
→
Species
SFDP01 sp004558185

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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