Cluster: MGYG000003613_CGC35
🧬 Cluster Details
- Gene Count: 13
- CAZyme Count: 2
- Substrate:
- Genome ID: MGYG000003613
- Continent: Oceania
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000003613_177 | MGYG000003613_177_1 | 283 | 2919 | + | 4.A.2.1.17 |
| TC | MGYG000003613_177 | MGYG000003613_177_2 | 2997 | 3779 | - | 2.A.5.5.2 |
| NULL(UNKNOWN) | MGYG000003613_177 | MGYG000003613_177_3 | 4021 | 4890 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | MGYG000003613_177 | MGYG000003613_177_4 | 4877 | 7240 | - | GH65 |
| STP | MGYG000003613_177 | MGYG000003613_177_5 | 7296 | 8150 | - | PIG-L |
| TC | MGYG000003613_177 | MGYG000003613_177_6 | 8163 | 8993 | - | 3.A.1.1.45 |
| TC | MGYG000003613_177 | MGYG000003613_177_7 | 8990 | 9907 | - | 3.A.1.1.34 |
| STP | MGYG000003613_177 | MGYG000003613_177_8 | 9981 | 11282 | - | SBP_bac_1 |
| TC | MGYG000003613_177 | MGYG000003613_177_9 | 11488 | 13245 | - | 9.B.33.1.1 |
| TF | MGYG000003613_177 | MGYG000003613_177_10 | 13245 | 14765 | - | HTH_AraC | HTH_AraC |
| CAZyme | MGYG000003613_177 | MGYG000003613_177_11 | 14950 | 17913 | - | GH16_24 |
| TF | MGYG000003613_177 | MGYG000003613_177_12 | 18801 | 19196 | + | Fe_dep_repress |
| TC | MGYG000003613_177 | MGYG000003613_177_13 | 19261 | 21135 | - | 3.A.3.6.10 |
Gene ID: MGYG000003613_177_1
Type: TC
Location: 283 - 2919 (+)
Type: TC
Location: 283 - 2919 (+)
Gene ID: MGYG000003613_177_2
Type: TC
Location: 2997 - 3779 (-)
Type: TC
Location: 2997 - 3779 (-)
Gene ID: MGYG000003613_177_3
Type:
Location: 4021 - 4890 (-)
Type:
Location: 4021 - 4890 (-)
Gene ID: MGYG000003613_177_4
Type: CAZyme
Location: 4877 - 7240 (-)
Type: CAZyme
Location: 4877 - 7240 (-)
Gene ID: MGYG000003613_177_5
Type: STP
Location: 7296 - 8150 (-)
Type: STP
Location: 7296 - 8150 (-)
Gene ID: MGYG000003613_177_6
Type: TC
Location: 8163 - 8993 (-)
Type: TC
Location: 8163 - 8993 (-)
Gene ID: MGYG000003613_177_7
Type: TC
Location: 8990 - 9907 (-)
Type: TC
Location: 8990 - 9907 (-)
Gene ID: MGYG000003613_177_8
Type: STP
Location: 9981 - 11282 (-)
Type: STP
Location: 9981 - 11282 (-)
Gene ID: MGYG000003613_177_9
Type: TC
Location: 11488 - 13245 (-)
Type: TC
Location: 11488 - 13245 (-)
Gene ID: MGYG000003613_177_10
Type: TF
Location: 13245 - 14765 (-)
Type: TF
Location: 13245 - 14765 (-)
Gene ID: MGYG000003613_177_11
Type: CAZyme
Location: 14950 - 17913 (-)
Type: CAZyme
Location: 14950 - 17913 (-)
Gene ID: MGYG000003613_177_12
Type: TF
Location: 18801 - 19196 (+)
Type: TF
Location: 18801 - 19196 (+)
Gene ID: MGYG000003613_177_13
Type: TC
Location: 19261 - 21135 (-)
Type: TC
Location: 19261 - 21135 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
SFDP01
Species
SFDP01 sp004558185
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.