Cluster: MGYG000003613_CGC28
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000003613
- CGC Family ID: CGCFAM_00086
- Continent: Oceania
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000003613_164 | MGYG000003613_164_1 | 978 | 1343 | + | 3.A.16.1.1 |
| peptidase | MGYG000003613_164 | MGYG000003613_164_2 | 1304 | 1702 | + | M41.UPW |
| NULL(UNKNOWN) | MGYG000003613_164 | MGYG000003613_164_3 | 2034 | 5612 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | MGYG000003613_164 | MGYG000003613_164_4 | 5660 | 6772 | - | GT111 |
Gene ID: MGYG000003613_164_1
Type: TC
Location: 978 - 1343 (+)
Type: TC
Location: 978 - 1343 (+)
Gene ID: MGYG000003613_164_2
Type: peptidase
Location: 1304 - 1702 (+)
Type: peptidase
Location: 1304 - 1702 (+)
Gene ID: MGYG000003613_164_3
Type:
Location: 2034 - 5612 (+)
Type:
Location: 2034 - 5612 (+)
Gene ID: MGYG000003613_164_4
Type: CAZyme
Location: 5660 - 6772 (-)
Type: CAZyme
Location: 5660 - 6772 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
SFDP01
Species
SFDP01 sp004558185
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| MGYG000003613_164_2 | vegetarian > vegan | 1.15823 | 0.02695 |