Cluster: MGYG000003613_CGC25
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 5
- Substrate:
- Genome ID: MGYG000003613
- CGC Family ID: CGCFAM_00005
- Continent: Oceania
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000003613_139 | MGYG000003613_139_10 | 7724 | 8653 | + | GT2 |
| CAZyme | MGYG000003613_139 | MGYG000003613_139_11 | 8655 | 9404 | + | GT2 |
| TC | MGYG000003613_139 | MGYG000003613_139_12 | 9426 | 10793 | + | 9.B.18.1.3 |
| NULL(UNKNOWN) | MGYG000003613_139 | MGYG000003613_139_13 | 10796 | 11776 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | MGYG000003613_139 | MGYG000003613_139_14 | 11742 | 12605 | + | GT2 |
| pfam | MGYG000003613_139 | MGYG000003613_139_15 | 12619 | 13761 | + | EpsG |
| CAZyme | MGYG000003613_139 | MGYG000003613_139_16 | 13742 | 14587 | + | GT2 |
| CAZyme | MGYG000003613_139 | MGYG000003613_139_17 | 14692 | 16026 | + | GT4 |
Gene ID: MGYG000003613_139_10
Type: CAZyme
Location: 7724 - 8653 (+)
Type: CAZyme
Location: 7724 - 8653 (+)
Gene ID: MGYG000003613_139_11
Type: CAZyme
Location: 8655 - 9404 (+)
Type: CAZyme
Location: 8655 - 9404 (+)
Gene ID: MGYG000003613_139_12
Type: TC
Location: 9426 - 10793 (+)
Type: TC
Location: 9426 - 10793 (+)
Gene ID: MGYG000003613_139_13
Type:
Location: 10796 - 11776 (+)
Type:
Location: 10796 - 11776 (+)
Gene ID: MGYG000003613_139_14
Type: CAZyme
Location: 11742 - 12605 (+)
Type: CAZyme
Location: 11742 - 12605 (+)
Gene ID: MGYG000003613_139_15
Type: pfam
Location: 12619 - 13761 (+)
Type: pfam
Location: 12619 - 13761 (+)
Gene ID: MGYG000003613_139_16
Type: CAZyme
Location: 13742 - 14587 (+)
Type: CAZyme
Location: 13742 - 14587 (+)
Gene ID: MGYG000003613_139_17
Type: CAZyme
Location: 14692 - 16026 (+)
Type: CAZyme
Location: 14692 - 16026 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
SFDP01
Species
SFDP01 sp004558185
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.