Cluster: MGYG000003613_CGC23
🧬 Cluster Details
- Gene Count: 11
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000003613
- Continent: Oceania
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000003613_126 | MGYG000003613_126_8 | 6483 | 7328 | + | 3.A.1.149.1 |
| NULL(UNKNOWN) | MGYG000003613_126 | MGYG000003613_126_9 | 7349 | 8017 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TF | MGYG000003613_126 | MGYG000003613_126_10 | 8007 | 8405 | + | GntR |
| TC | MGYG000003613_126 | MGYG000003613_126_11 | 8411 | 9127 | + | 3.A.1.105.9 |
| NULL(UNKNOWN) | MGYG000003613_126 | MGYG000003613_126_12 | 9130 | 9651 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | MGYG000003613_126 | MGYG000003613_126_13 | 9695 | 11623 | + | GH33 |
| pfam | MGYG000003613_126 | MGYG000003613_126_14 | 11696 | 12550 | + | TP_methylase |
| NULL(UNKNOWN) | MGYG000003613_126 | MGYG000003613_126_15 | 12563 | 13093 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | MGYG000003613_126 | MGYG000003613_126_16 | 13199 | 13993 | + | 3.A.1.3.3 |
| TC | MGYG000003613_126 | MGYG000003613_126_17 | 13999 | 14700 | + | 3.A.1.3.15 |
| TC | MGYG000003613_126 | MGYG000003613_126_18 | 14690 | 15430 | + | 3.A.1.3.15 |
Gene ID: MGYG000003613_126_8
Type: TC
Location: 6483 - 7328 (+)
Type: TC
Location: 6483 - 7328 (+)
Gene ID: MGYG000003613_126_9
Type:
Location: 7349 - 8017 (+)
Type:
Location: 7349 - 8017 (+)
Gene ID: MGYG000003613_126_10
Type: TF
Location: 8007 - 8405 (+)
Type: TF
Location: 8007 - 8405 (+)
Gene ID: MGYG000003613_126_11
Type: TC
Location: 8411 - 9127 (+)
Type: TC
Location: 8411 - 9127 (+)
Gene ID: MGYG000003613_126_12
Type:
Location: 9130 - 9651 (+)
Type:
Location: 9130 - 9651 (+)
Gene ID: MGYG000003613_126_13
Type: CAZyme
Location: 9695 - 11623 (+)
Type: CAZyme
Location: 9695 - 11623 (+)
Gene ID: MGYG000003613_126_14
Type: pfam
Location: 11696 - 12550 (+)
Type: pfam
Location: 11696 - 12550 (+)
Gene ID: MGYG000003613_126_15
Type:
Location: 12563 - 13093 (+)
Type:
Location: 12563 - 13093 (+)
Gene ID: MGYG000003613_126_16
Type: TC
Location: 13199 - 13993 (+)
Type: TC
Location: 13199 - 13993 (+)
Gene ID: MGYG000003613_126_17
Type: TC
Location: 13999 - 14700 (+)
Type: TC
Location: 13999 - 14700 (+)
Gene ID: MGYG000003613_126_18
Type: TC
Location: 14690 - 15430 (+)
Type: TC
Location: 14690 - 15430 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
SFDP01
Species
SFDP01 sp004558185
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.